LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr5g1276	ATGGGATCTAACTCAATGAAGGATTATCTAAAAAAATATGTTAGTAACCCTCAAGAAGACAAGAAAAAGAAGAAAAAGAAGAGGAAAACTCTACCACAAGCATCTGGATTGTTAGTCGTTGATGAAGATCCAGCCTGGCAGAAACCCGTGGATCTCGGAGAAGAAAATGTTGAGAACTCATCCGATGAGGAGAAACCGGTAGTTGACGAAGACATTGAAGTAAAGCGTATGAAACGGCTTGAGCAGCTGAAGGCCAGGCGTTCTTATCATGATATATCCGAGGATGGAAGTGGTTGGATTCCACTTTCTTCTAAGTCTGAGAATCTTGGTGACTCAAATGATATGTCTCCACCACGTAAGCAGAGGGTTCGAAATGACACTCCTTCACCAGAACCTGAATTAAATCATTCCACTTCTAACAAAACGGGTGCTGATTTATCCCCTTCGCGTCGGCAGTTGAAACGCAAAGACACTCCATCACCTGAACGTAACTCACAACCTGCACATTCAGAGGAACTGAATTCTGATTTATCTCCTCCTCGTAAACATAGAGATCAGATAGCTCGTGAACCAAGGTTGTCTAAATCAAAATTTGAAGATAGTGATAGATCACCTCCTCGACGGCAACATATGGAAGATCTTTCTCCACCTAGACGAGGTCGTCATGATTCTCCCTCTCAAGATACTTTTCATGGAACTGTGTCATCTGACCTTTCACCCCCGAGGAAACGCCAGCATAGTGTTGCAAGATCGAGTTTATCTGATGTTTCTCGTCATTCGCATCCATCTTTCGATCATGACCTATCTCCACCAAGGAAGAAATCGAAGGAGCTATCCATTGCAGGATCTGTTAATGAAAGAAAGACGGGTTTGATTTCTGGTAAGGATATCAGAGAAGAGATTGACAAAAAGAAGAAGGAGGATTTGCTGAGACTTAAACAGATGGACCCTGTCATCAGTGGGCGTGGCGCTGAACCTGTATTTCGTGATAACAAAGGAGCACGCATTACCAAAGAGGAATACGTAAACTCAAAACAGAAAGTAGAAGAAAAGCCCAAGGAGATTCAAATAGAATGGGGCAAAGGCTTGGCTCAAAAGCGAGAAGCTGAGGCAAGGCAAAAGGAACTAGAGGTTCAGAAGGAAAAACCTTTTGCTCGGACCAGAGATGATCCTGAACTTGACAAGTCACTGAAGGAGAGGATAAGATGGGGTGATCCTATGGCCCATCTAGTAAAGAAAAAATATCCAGAGCCTGTTCTGCCGAACTTGGGGGATAGTGATAAAATGAGGGAATCTGGTTTTGTTGTTCCTCAAGAGATACCAAGTCATAGCTGGTTGAAGAGAGGTTTAGATGCCGCTCCAAATCGGTATGGGATACGGCCGGGACGACATTGGGATGGTGTTGATCGTAGTAACGGGTTCGAGAAGGCATTGTTTAAGAGGATGAATGAGAGACAAGCTACAGACAAAGAGGCTTATCTTTGGTCTGTCTCTGATATGTAA	1503	0.4358	MGSNSMKDYLKKYVSNPQEDKKKKKKKRKTLPQASGLLVVDEDPAWQKPVDLGEENVENSSDEEKPVVDEDIEVKRMKRLEQLKARRSYHDISEDGSGWIPLSSKSENLGDSNDMSPPRKQRVRNDTPSPEPELNHSTSNKTGADLSPSRRQLKRKDTPSPERNSQPAHSEELNSDLSPPRKHRDQIAREPRLSKSKFEDSDRSPPRRQHMEDLSPPRRGRHDSPSQDTFHGTVSSDLSPPRKRQHSVARSSLSDVSRHSHPSFDHDLSPPRKKSKELSIAGSVNERKTGLISGKDIREEIDKKKKEDLLRLKQMDPVISGRGAEPVFRDNKGARITKEEYVNSKQKVEEKPKEIQIEWGKGLAQKREAEARQKELEVQKEKPFARTRDDPELDKSLKERIRWGDPMAHLVKKKYPEPVLPNLGDSDKMRESGFVVPQEIPSHSWLKRGLDAAPNRYGIRPGRHWDGVDRSNGFEKALFKRMNERQATDKEAYLWSVSDM*	501

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr5g1276	500	MobiDBLite	consensus disorder prediction	291	313	-	-
	Tpr5g1276	500	MobiDBLite	consensus disorder prediction	227	258	-	-
	Tpr5g1276	500	MobiDBLite	consensus disorder prediction	259	274	-	-
	Tpr5g1276	500	MobiDBLite	consensus disorder prediction	175	226	-	-
	Tpr5g1276	500	MobiDBLite	consensus disorder prediction	1	313	-	-
	Tpr5g1276	500	MobiDBLite	consensus disorder prediction	130	147	-	-
	Tpr5g1276	500	MobiDBLite	consensus disorder prediction	59	93	-	-
	Tpr5g1276	500	Pfam	Pre-mRNA-splicing factor of RES complex	326	483	IPR018609	-
	Tpr5g1276	500	MobiDBLite	consensus disorder prediction	370	393	-	-
	Tpr5g1276	500	PANTHER	BUD13 HOMOLOG	4	500	-	-
	Tpr5g1276	500	MobiDBLite	consensus disorder prediction	148	162	-	-
	Tpr5g1276	500	MobiDBLite	consensus disorder prediction	99	115	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr5g1276	Tpr-Chr5	25138049	25145903	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr5g1276	K13106		-	gmx:100783213	628.632