Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1268 ATGTCAAATTCATATCCTTATGTTGATCTTCCTATTATAGACATTTCTGAACCATTACAATCATCTTCTTTAACAACTCTCTCTAAAGCTTGCAAAGATTGGGGATTTTTCCACATAATTAATCATGAGATATCAAAAGATCTTTGTAACCAACTTCATTCATTATCTAAATTAATCTTTAATCTTCCTTCTGATACTAAGCTTAAACTTGGTCCTTTCTCTTCTATAAAATCTTACACACCTCACTTCATTGCTTCTCCATTCTTTGAAAGCCTTAGAGTTGATGGACCTAACTTCTATGTATCTGCTAAGAGTTCTCAAGATGTTTTGTTTGAAACACAAAATTCTAAATTCAGTGAGACACTAGAGGACTATTGTAGTAAAATGGCAAATTTATCTGAAAGAATTTTAAAGCTTGTGTTAATGAGCTTAGGAGAAGGATTTGAGAAGCTATTTTATGATTCACAATTCAAAAAGTGTCAAGGTTACTTAAGAATAAACAACTATACATCACCAGAAATTATGGATTTGGATAATCATGTTGAGGGACTTGGAATGCATACTGACATGAGCTGCATAACTATCTTATACCAAGATGAAATTGGAGGACTTCAAGTTAAAACACATGAAGGAAAATGGATTGATATAAGTCCTTCTGAAGGGTCCTTAGTGGTGAATATAGGTGATATGATGCAAGCTTGGAGTAATGATAAGTTAAGGTCTTCTGAACATAGAGTTATTTTGAAGCAACCTGTTAATAGATTTTCTTTGGCTTTTTTTTGGTGTTTTGAGGATGAGAAAGTGATTATGGCACCTAATGAAGTTGTTGGAGAAGGAAATAAGAGAGTTTATGATCCTTTTGTTTGCAAAGATTATGTGAAGTTTAGAGAGAATAATCAAAGAGGAAGATTTGAAAAAGTTGGTTATACTGTTAGAGATTTTGCTGGAATTAAGTCTCAATTGTAA 966 0.3219 MSNSYPYVDLPIIDISEPLQSSSLTTLSKACKDWGFFHIINHEISKDLCNQLHSLSKLIFNLPSDTKLKLGPFSSIKSYTPHFIASPFFESLRVDGPNFYVSAKSSQDVLFETQNSKFSETLEDYCSKMANLSERILKLVLMSLGEGFEKLFYDSQFKKCQGYLRINNYTSPEIMDLDNHVEGLGMHTDMSCITILYQDEIGGLQVKTHEGKWIDISPSEGSLVVNIGDMMQAWSNDKLRSSEHRVILKQPVNRFSLAFFWCFEDEKVIMAPNEVVGEGNKRVYDPFVCKDYVKFRENNQRGRFEKVGYTVRDFAGIKSQL* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1268 321 SUPERFAMILY Clavaminate synthase-like 4 299 - -
Tpr5g1268 321 Pfam non-haem dioxygenase in morphine synthesis N-terminal 10 78 IPR026992 -
Tpr5g1268 321 Gene3D - 2 295 IPR027443 -
Tpr5g1268 321 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 156 264 IPR005123 -
Tpr5g1268 321 Pfam 2OG-Fe(II) oxygenase superfamily 165 260 IPR044861 -
Tpr5g1268 321 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 2 314 - -
Tpr5g1268 321 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 2 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1268 Tpr-Chr5 25069184 25071406 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1268 6 292 Glycosyltransferase AT5G59530 28.333 4.90e-23 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1268 - - gmx:100782766 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1268 5 25069184 25071406 Tpr5g1268 5 25069184 25071406 ECH