Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1267 ATGTCATTAATCTGCGGGTTTCCTTTACTTGAGTGTGTTTATTGTTTGGGTTGTACTCGTTGGGTTTGGAAAAAATGTCTGTATACCGCAGGCTATGAGAGTGAAAATTGGGGTTTGGCTACTGCAGAAGAGTTTGAGCCTATACCTCGAATTTGTCGAGTAATCTTAGCTGTTTACGAAGATGATATTCGTAACCCGCAGTGGGCTCCCCAAGGTGGTTATGGCATTAATCCTGATTGGATTGTCTTGCGGAAGGACTACGGGGATAACCAAGGTTGTGTTACTCCGTATATGATATACCTCGATCATGATCGTGGTGAGATTATACTGGCTGTTAGTGGACTCAATTTAGCAAAGGAAAGTGATTATGCAGTTTTGCTTGATAACAAACTAGGACAAACAGCAGATTATACTGGTGGATATGTTCATAATGGGTTATTGAAGGCAGCGGATTGGGTTTTTGATGCGGAATGTGAGGTTCTGAGGAAGCTAATAGCAGAAAATCCAACTTATATGCTGACATTTATTGGACATTCGCTCGGGGCTGGGGTGGTGGCCTTATTGACAATAATAGCGATTAGTAGTCGCGACAAATTAGGGATACAAAGAAACAAGATAAAATGCTATGCGATTGCTCCTGCTCGATGCATGTCTCTCAATTTGGCTGTAAGATATGCGGATGTGATCAATTCTATCGTACTACAGGACGATTTTTTACCTCGAACAACCACTGCGGCGGAAACCCTCTACAAGTCACTTTTATGTTGGCCTTGTTTATTGTGTCTCCTGTGCTTAAAAGATACTTGCACACTGGAGGAGAAGAAGCTTAGAGATCCAAGGCGTCTGTACGCACCTGGTCGTCTCTATCACATTGTGGAGCGAAAGCCCTTCAGGTTTGGAAGATATCCACCGGTTGTTAGGACAGCAGTACCTGTTGATGGGAGGTTTGATCATATAGTTATTTCTTGCAATGCAACTTCTGATCATGCCATCCTTTGGATAGAGAGGGAATCACGACGCGCTCTCGATTTAATGCTAGAGAAAGATCGGCATATGGAGATTCCAGCAGAGCAGAAGATGGTGAGGCAAGAATCTCTAGCTCGCGAACACAGTGAAGAGTATCGTGCAGCTCTTCGGAGGGCAGTTGCTTTGGATATTCCTCAAGCATACTCACCTTCCCCATACGGAACATTTCATGAAATTGATGTTGAGGAAGATTCTGGAAGATCTAGTGACAACGGCTCCTCCTTGTCTCATAACAAACGATCAGAGAGTTGGAATGAATTTGTCGGGCGCATGTTTGACGTGGACGACACAGGTCATATGGTATTCAAGAAAACAACCCCTTAA 1350 0.437 MSLICGFPLLECVYCLGCTRWVWKKCLYTAGYESENWGLATAEEFEPIPRICRVILAVYEDDIRNPQWAPQGGYGINPDWIVLRKDYGDNQGCVTPYMIYLDHDRGEIILAVSGLNLAKESDYAVLLDNKLGQTADYTGGYVHNGLLKAADWVFDAECEVLRKLIAENPTYMLTFIGHSLGAGVVALLTIIAISSRDKLGIQRNKIKCYAIAPARCMSLNLAVRYADVINSIVLQDDFLPRTTTAAETLYKSLLCWPCLLCLLCLKDTCTLEEKKLRDPRRLYAPGRLYHIVERKPFRFGRYPPVVRTAVPVDGRFDHIVISCNATSDHAILWIERESRRALDLMLEKDRHMEIPAEQKMVRQESLAREHSEEYRAALRRAVALDIPQAYSPSPYGTFHEIDVEEDSGRSSDNGSSLSHNKRSESWNEFVGRMFDVDDTGHMVFKKTTP* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1267 449 Gene3D alpha/beta hydrolase 39 253 IPR029058 -
Tpr5g1267 449 CDD Lipase_3 44 241 - -
Tpr5g1267 449 Pfam Lipase (class 3) 119 243 IPR002921 GO:0006629
Tpr5g1267 449 SUPERFAMILY alpha/beta-Hydrolases 43 244 IPR029058 -
Tpr5g1267 449 Pfam Lipase 3 N-terminal region 9 74 IPR005592 GO:0016042
Tpr5g1267 449 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 447 - -
Tpr5g1267 449 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1267 Tpr-Chr5 25061185 25066546 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1267 1 446 Miscellaneous Gene Families AT4G00500 65.778 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1267 - - gmx:100800227 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1267 5 25061185 25066546 Tpr5g1267 5 25061185 25066546 ECH