Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1247 ATGTACCATCCCATTCCCAATAACCACCAAATCAAACCAACCACAACAACAACCCTAATTTCCCAATTCATCCCAAAATGTCACACTCAACAACTCCTCTACCAACTCAAACCCTTCAAACCCAAAACCCTAACAACAACAACAACAACAACATGCTCCTATTCTTCTCCTCCACCACCACCACCACCACCCTCCCCAATCAAAACCCTAATCTCAATCCTCCGTACAATCCCCGATTGGGCAGACCAAAACCAAGAACGCGGTATGCAAAAAAACCGCACTCTCTACAATCACACTAATTGGGTTCAACATCGTAGCTCTCTCCGTCACGTGCGTCACTTCTTCTCTAGTCTCTCCTCACGTGTCATTCTTTCTTTAGTCCCTCCTGTTCTTTTCTTCACTTCTTTCGCCGCCGTCATCGCCGCTTATAACACCGCCGTACTTCTCGACTTCTTCCCGGAGTTTTTTCCTGTGCTTAGAGCTTCTTCTCTTCCTTATCAGTTAACGGCGCCGGCGCTTGCGCTTTTGCTTGTTTTTAGAACGGAGGCTTCTTATTCTAGATTTGTTGAAGGGAAGAAAGCTTGGACTAGTGTTATTTCTGCTGCTCATGATTTTGCTAGACTTGTTATGTCTGTTCAATCTGATTTTCATCTCAAGAACGCGCTTTTGAATTATATAATCGCTTTTCCTCTTGTGCTTAAGTGTCACGTGTTGTATGGTTCAGACATTGCGAGAGATCTTCAAAATTTGCTAGAAGTAGATGATATAGCATTGATCATGAATTCGAAACATCGACCTCGCTGCATTATTGAGTTTATATCGCAGAGTATTCGGCTACTAAAATTGGAGGATTCTAGAAGAAATGTCCTGGAATCAAAGATCACTTGTTTCCATGAAGGAATTGGCTTATGTGAACAGCTTATGGGTATTCCCATTCCGTTATCATATACTCGCTTGACTTCAAGGTTTCTTGTCCTATGGCATCTGACGCTCCCTATCATACTTTGGGATGATTGTCATTGGGTTGTGGTTCCTGCTACCTTTATTAGCGCTGCATCTTTGTTCTGCATTGAAGAAGTTGGAGTTCTTATAGAGGATCCATTTCCGATGCTTGCACTTAATGATCTCTGCCAGAAGGCCCAGAAAGACATTGAAGAAGCAATTGCAACCGAAAATGTGATTCATGCGCACCTTGTTGCAAAGCGAAACTACCACTCTAAAGAGCATTCACCAAATGGCTGGCCTAACTCCTAA 1254 0.4306 MYHPIPNNHQIKPTTTTTLISQFIPKCHTQQLLYQLKPFKPKTLTTTTTTTCSYSSPPPPPPPPSPIKTLISILRTIPDWADQNQERGMQKNRTLYNHTNWVQHRSSLRHVRHFFSSLSSRVILSLVPPVLFFTSFAAVIAAYNTAVLLDFFPEFFPVLRASSLPYQLTAPALALLLVFRTEASYSRFVEGKKAWTSVISAAHDFARLVMSVQSDFHLKNALLNYIIAFPLVLKCHVLYGSDIARDLQNLLEVDDIALIMNSKHRPRCIIEFISQSIRLLKLEDSRRNVLESKITCFHEGIGLCEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWVVVPATFISAASLFCIEEVGVLIEDPFPMLALNDLCQKAQKDIEEAIATENVIHAHLVAKRNYHSKEHSPNGWPNS* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1247 417 PIRSF UCP016988 15 417 IPR024701 GO:0005247|GO:0042548
Tpr5g1247 417 PANTHER UPF0187 PROTEIN YNEE 33 414 IPR044669 -
Tpr5g1247 417 Coils Coil 370 390 - -
Tpr5g1247 417 PANTHER BESTROPHIN/UPF0187-RELATED 33 414 - -
Tpr5g1247 417 Pfam Bestrophin, RFP-TM, chloride channel 104 376 IPR021134 GO:0005254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1247 K08994 - gmx:100786921 578.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1247 5 24704879 24709186 Tpr5g1247 5 24704879 24709186 ECH