Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1193 ATGGTGGTGGCTTCCCCAAATTCGATCATAGGAGAAAAGATTATACCTATTGACCTACCAATGATAGACCTATCATCCGAAAAATCAATAGTTATGAAACTCATTGTGAAAGCTTGTGAAGAATATGGTTTTTTCAATGTGATTAACCATGGTATCCCTCATGACATCATAACAAAAATGGAAGAAGTAGGTTTTGATTTCTTTGCAAAACCAATGGAACAAAAGAAATTAGTTGCATTTGATAAACCTTTTGGTTATGGTTGCAAGAATATAGGCTTCAATGGAGACATGGGTGAGGTTGAGTACCTTCTTCTCAATGCCAATGTTCCTTCTATTCCTAATGATACATCATATTTCAGCTCTATTGTAAGTACTTATACAGAAGCTGTGAAGAGGCTTGCATGTGAGATATTGGAGCTAATGGCAGAAGGATTGGGGGTCCCTAATAAATCCATTTTCAGCACATTCATCACTCAACTTGATAATGATTCACTCCTTAGGTTCAATCACTACCCTCCTAAAGACTGCAAAGATAGAGACAACTCAAATTCCTACAACGTTGGCTTTGGAGAACATTCTGACCCTCAGATTCTTACTATCCTTAGATCCAACGATGTTGCTGGACTTCAAATTTCACTTCAACATGGTGTGTGGAACCCAGTTACTCCTGATCCCTTTGCTTTCTGTGTTAATGTTGGTGATCTCCTTGAGGTTATGACAAATGGAAGATTTATGAGTGTTCGACATAGGGCTGTGACCAACTCATACAAGTCTAGAATGTCGGTGGCATATTTTGGGGCTCCACCACTTGATGCATGCATTGTTGCTCCTTCAGTTATGGTTACACCAAACAGGCCCTCCCTTCTCTACAAACCCTTCACTTGGGCAGAATACAAGAAAGTCACTTACTCTCTAAGGCTTGGAGACAATCGCATTGACATTTTCAAGAATTGCACACAAATAGAGTAA 969 0.3932 MVVASPNSIIGEKIIPIDLPMIDLSSEKSIVMKLIVKACEEYGFFNVINHGIPHDIITKMEEVGFDFFAKPMEQKKLVAFDKPFGYGCKNIGFNGDMGEVEYLLLNANVPSIPNDTSYFSSIVSTYTEAVKRLACEILELMAEGLGVPNKSIFSTFITQLDNDSLLRFNHYPPKDCKDRDNSNSYNVGFGEHSDPQILTILRSNDVAGLQISLQHGVWNPVTPDPFAFCVNVGDLLEVMTNGRFMSVRHRAVTNSYKSRMSVAYFGAPPLDACIVAPSVMVTPNRPSLLYKPFTWAEYKKVTYSLRLGDNRIDIFKNCTQIE* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1193 322 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 161 268 IPR005123 -
Tpr5g1193 322 PANTHER PLANT GIBBERELLIN 2-OXIDASE 3 317 - -
Tpr5g1193 322 Pfam 2OG-Fe(II) oxygenase superfamily 163 266 IPR044861 -
Tpr5g1193 322 SUPERFAMILY Clavaminate synthase-like 16 310 - -
Tpr5g1193 322 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 317 - -
Tpr5g1193 322 Gene3D - 7 305 IPR027443 -
Tpr5g1193 322 Pfam non-haem dioxygenase in morphine synthesis N-terminal 19 82 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1193 Tpr-Chr5 23527840 23539766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1193 17 265 Glycosyltransferase AT5G59530 28.839 3.00e-24 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1193 K04125 - gmx:100811043 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1193 5 23527840 23539766 Tpr5g1193 5 23527840 23539766 ECH