Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1183 ATGGCTAGGAAGGGTAATCAACAGAAGAATGGAGTTAACCATAAAAAAGGGGTTTCTGGTGGTGTTCTTCCGGGTATGAAAGGTCATGAAGGAGGGCAGGTGAAAGTTTTTCCGGCGGAGGAACTCGCAAATGGTCTTTCGCAGAAAACGTGTGAGGCTAGTTCTGCTGGTGATGACAATAGCAATGATCGAAAATATGAGAAGTTTTCTCGGAAAGATAAGCAAGGGACGAGTGCAAAGCATGAACTACCGGAGGAATCATTTTCTTTTGGGAGTAGTTCAGAGAATGGCAGCGAGAATGTCGAAGTTCCGATACAAGAAGGAAGTTGGAATTTGCCTAGAAGGCCTAGAAGTAATCAAGGTCAACAGAGTATCAAGAGTAGATTAAGCCATTTAGTGGAAGGTTTACAGTTGAGAAGTATGGTAGAAAAATTGGAGCTTGCTGATCATGCGGCAATTAGGAGATTAAGGCTGACAGTATTATCCATTTTTATAGCAGTTACGGAGTGGCTAACTAAGCAGAAACCGTTGTTTGTATCTATTAGAACTACCGTTTTAGAAGCTTGCGCTAATTTCAGGGCAAAGTTTAAGAAAGCATATCCAGTTGTTCTGACGTGGCTCATGCACTTTGGGAACATAATCCTTCTATTATCACTGTTTTGGTTGGATTGTGCTGTTCGGGGTATTGATTCATTTGTACGATTGGGTACAGCATCCTTCTTCTCTGTTATATGGTGCAGCTTATTCTCCCTGATCAGTATGATAGGGATGCTCAAGTTTCTGGTTGTCCTGGGTGTGGCTACCTTGATTGGATATTTTGTTGGCTTTGTGCTTGCAATTTTGGTGGTTGCTGTCATTGGAGTTATTATGTTGTGGTTTTATGGTAGCTTTTGGACAACTTCATTTTTCCTCATCCTTGGAGGATTGGCATTTATGTCACGTCATGATCGTGTGGCACTTTTTATCGCAACTGTGTATTCTGTCTATTGTGCTTGGCTGTATGTTGGGTGGCTTCGTCTGTTCTTGGCTTTTAATTTAGCTTTCATCTCGAGTGATGTTCTGGTATACTTCCTCAAGAAAAACATAGATCAACAGAGTAGATCGAATTCATTTGAGCAAAGAGCTGGAATGAACAGTCAACCAGGTTTTGGAAATGATGAATCAATGCCGGCATCTTCCTCTGAGAATGGACCAGGGCCATTTGCAGACCGTAATGCAGGAGTCCCTTCAACCAGTGGAGTTGACTCTGATGTAACTTCTGAAGATGAAGTTGTTCGATTGTTGAACTGTTCCGATCACTATTCAGCACTGGGCTTGATGCGCTATCAAAATATAGATGTTTCAATACTGAAGCGGGAATACAGAAAGAAGGCAATGTTGGTACATCCTGATAAAAATATGGGTAATGAAAAAGCCGTAGAAGCCTTTAAGAAACTTCAAAATGCATATGAGATTCTAATGGATTCCTTGAAGCGAAAAGCTTATGATGATGAGCTAAGGAGAGAAGAGATTCTTAATGTATTCAACAGATTTAATAATGCTCCCCGTCGGAATAGTAGGCATGGATTCTTTTCTTCTGGGTTTGCACATTCAGATGCAGATGGTGAGGAGCCATTTGGTGATTCAAGGCGAATAGCTTGCAAAAGGTGTGGTGGCTTTCATCTCTGGATACACACCAAGAAACAAAAGTCTCGGGCAAGATGGTGCCAGGATTGTCAAGATTTTCACCAAGCCAAGGATGGTGATGGATGGGTTGAACAATCTTCCCAACCATTTCTTTTTGGCTTATTACAGAAGGTAGACGCTCCTTCTGCTTATGTGTGTGCAGATAGCAAAATATTTGATGCCACTGAATGGTATATCTGTCAGGGTATGAGATGTCCAGTAAATACGCACAAGCCAAGTTTTCATGTGAACACCAGTATAATGTCGAAAAATACTCCCGGCAAAGGAACTAGCTCTTCAACGCCTAGAGGTGGGCGAGTGCCGACACCTCCTAATATGCCAACACCTAATTTTGAAGAAAACATGACCGAGGAAGAATTTGTCGAGTGGTTACAGAATGCAGTACAATCAGGTGTGTTCGACAATTTCAGTGGCGGCACTGCAACAGACAGCCCATCTGGCAAATCTGGAAATGGGATGAAAAATCCTGGCACTGGCACTGGCGTCAGTAGTGGCAGCAAAAGAAAGAAAAAAGGAAAAAAGCAATGGTGA 2217 0.4217 MARKGNQQKNGVNHKKGVSGGVLPGMKGHEGGQVKVFPAEELANGLSQKTCEASSAGDDNSNDRKYEKFSRKDKQGTSAKHELPEESFSFGSSSENGSENVEVPIQEGSWNLPRRPRSNQGQQSIKSRLSHLVEGLQLRSMVEKLELADHAAIRRLRLTVLSIFIAVTEWLTKQKPLFVSIRTTVLEACANFRAKFKKAYPVVLTWLMHFGNIILLLSLFWLDCAVRGIDSFVRLGTASFFSVIWCSLFSLISMIGMLKFLVVLGVATLIGYFVGFVLAILVVAVIGVIMLWFYGSFWTTSFFLILGGLAFMSRHDRVALFIATVYSVYCAWLYVGWLRLFLAFNLAFISSDVLVYFLKKNIDQQSRSNSFEQRAGMNSQPGFGNDESMPASSSENGPGPFADRNAGVPSTSGVDSDVTSEDEVVRLLNCSDHYSALGLMRYQNIDVSILKREYRKKAMLVHPDKNMGNEKAVEAFKKLQNAYEILMDSLKRKAYDDELRREEILNVFNRFNNAPRRNSRHGFFSSGFAHSDADGEEPFGDSRRIACKRCGGFHLWIHTKKQKSRARWCQDCQDFHQAKDGDGWVEQSSQPFLFGLLQKVDAPSAYVCADSKIFDATEWYICQGMRCPVNTHKPSFHVNTSIMSKNTPGKGTSSSTPRGGRVPTPPNMPTPNFEENMTEEEFVEWLQNAVQSGVFDNFSGGTATDSPSGKSGNGMKNPGTGTGVSSGSKRKKKGKKQW* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1183 738 SMART dnaj_3 431 491 IPR001623 -
Tpr5g1183 738 PANTHER OS03G0832900 PROTEIN 1 738 - -
Tpr5g1183 738 Pfam Cleavage inducing molecular chaperone 542 639 IPR032843 -
Tpr5g1183 738 PANTHER OS03G0832900 PROTEIN 1 738 - -
Tpr5g1183 738 MobiDBLite consensus disorder prediction 58 81 - -
Tpr5g1183 738 MobiDBLite consensus disorder prediction 696 727 - -
Tpr5g1183 738 MobiDBLite consensus disorder prediction 640 661 - -
Tpr5g1183 738 Gene3D DnaJ domain 420 512 IPR036869 -
Tpr5g1183 738 ProSiteProfiles dnaJ domain profile. 432 499 IPR001623 -
Tpr5g1183 738 MobiDBLite consensus disorder prediction 1 100 - -
Tpr5g1183 738 ProSitePatterns Nt-dnaJ domain signature. 476 495 IPR018253 -
Tpr5g1183 738 Pfam DnaJ domain 432 496 IPR001623 -
Tpr5g1183 738 PRINTS DnaJ domain signature 454 469 IPR001623 -
Tpr5g1183 738 PRINTS DnaJ domain signature 471 491 IPR001623 -
Tpr5g1183 738 MobiDBLite consensus disorder prediction 640 667 - -
Tpr5g1183 738 CDD DnaJ 432 488 IPR001623 -
Tpr5g1183 738 SUPERFAMILY Chaperone J-domain 427 510 IPR036869 -
Tpr5g1183 738 MobiDBLite consensus disorder prediction 696 738 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1183 Tpr-Chr5 23253893 23260659 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g1183 1 697 Miscellaneous Gene Families AT5G49580 51.983 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1183 K09534 - gmx:100789594 1048.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1183 5 23253893 23260659 Tpr5g1183 5 23253893 23260659 ECH