Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1182 ATGGAGACATTATTCCATCGTTCATCATATCTAAAACCTTCTTATCTCTTACCTAAACCTCCAAAAAAACCTTTCATCATGTTAGCATCAAATTCTCTTAGATTCAACTTCAATTACTTCCCAAATTCCAATCTTTCTTCTTCATCATCATCATTTTCAGGGCAATTTTCTCTTCAAAATAAGCCTAGAAAATCATTACCACTTATTCTCAATGCCCGCAACAATGATAAGAAAGAAGATAGTCATAGTTTTGTACCCAAATCAGATGAAGTAACTGGGTTCTTCCCTGAATCTGTTCTTCTTAAAAAGAAGGAAGTTGAGGAAGATGGTAAGCTTCTTCCGGAGTTTGAAGATGATGATGAAAGAGAACTCTATGAATCGCTGAGGCTTGAGGTGGAATCTGATATGGATGTTGAACTATTGCGCCACTACGAGATTGTTTACTTAATTCACGAGAAGTATGAAGAAGAGGTTGCAGCTGTCAATGAAAAAGTTCAAGACTTTTTGAGGGAGAAGAAAGGAAGAGTGTGGAGATTCAATGATTGGGGTATGAGAACATTGGCTTACAAAATACAGAAAGCTAGTAAAGCACACTATATTTTGATGAACTTTGAGTTGGACGCCAAATATACCGACGAGTTCAAGAATATGTTGGACAGAGATGAAAGAGTCATTCGGCATCTGGTGATGAAGAGGGACGAGGCAATCACTGAAGATTGCCCTCCCCCTCCTGAATTTAATACTCTTGTTGCTAACATAGATGATGAAGATGACGAAGATGATGAAGACGACGAAGAATGGGATGATGAAGATGATGAAGACGACGACGACGATGGTGAAGATGTTGATAATGATGAAGAAGAAGAAGTTGATGATGATGATGATGATGATGATGATGAGGATATTGAGGGTGGTGAGGGGATTTTCATAGTAGATGACGATGATTTGGGAATATCAGAGAGCCAGAAAATAGCATAA 978 0.3814 METLFHRSSYLKPSYLLPKPPKKPFIMLASNSLRFNFNYFPNSNLSSSSSSFSGQFSLQNKPRKSLPLILNARNNDKKEDSHSFVPKSDEVTGFFPESVLLKKKEVEEDGKLLPEFEDDDERELYESLRLEVESDMDVELLRHYEIVYLIHEKYEEEVAAVNEKVQDFLREKKGRVWRFNDWGMRTLAYKIQKASKAHYILMNFELDAKYTDEFKNMLDRDERVIRHLVMKRDEAITEDCPPPPEFNTLVANIDDEDDEDDEDDEEWDDEDDEDDDDDGEDVDNDEEEEVDDDDDDDDDEDIEGGEGIFIVDDDDLGISESQKIA* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1182 325 TIGRFAM S6: ribosomal protein bS6 142 233 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Tpr5g1182 325 CDD bS6 143 232 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Tpr5g1182 325 MobiDBLite consensus disorder prediction 251 325 - -
Tpr5g1182 325 SUPERFAMILY Ribosomal protein S6 141 241 IPR035980 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Tpr5g1182 325 MobiDBLite consensus disorder prediction 251 310 - -
Tpr5g1182 325 Pfam Ribosomal protein S6 143 231 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Tpr5g1182 325 Gene3D - 137 239 IPR014717 -
Tpr5g1182 325 Hamap 30S ribosomal protein S6 [rpsF]. 141 234 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Tpr5g1182 325 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6 104 254 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Tpr5g1182 325 Coils Coil 151 171 - -
Tpr5g1182 325 PANTHER 28S RIBOSOMAL PROTEIN S6, MITOCHONDRIAL 104 254 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1182 - - gmx:100790128 322.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1182 5 23247521 23251513 Tpr5g1182 5 23247521 23251513 ECH