Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1177 ATGAAAAAAGCCACAACCATTATTATTTCATCATTTACAATCCACATTCTTCTCCTTGTTTCCATTCCCTTAACATCATCACAATCAAATGAAAACACAACTATAGTAGATCAAATATGCAAAAAAACACCCTTTTATGATCTATGTAGTTCAATTCTAAATTCAAACCCACTTACACCAAAAACCGATCTAAAAACCATAGCAATAGTAATGGTAAAAAACATTCTCTCAAATGCAACTGACACATTAAATTACATTGAAGGGTTAATCAAGAAAACTTCAGATCGTGGAATGGAACAAGCATTAGCATTTTGTGCTGAATCATATATCCCAGTTGTGAAATACACTCTTCCTCAAGCTACTGATGCTATAAATCAAAATCGGTTTGCTTTTGCTAGTTATTGTGTTAATGATGCTGTTAAAGAAATTAATTCTTGTAATAAGAAATTTTCTGGGTTGACTTTGGTGTCACCTTTAGGGGATAGAAATGGTATTGTTCAAAAGCTTGTTGATGTTGCTTCTGCTATTATTAAACAACTATTGAAGGGTTGA 552 0.3207 MKKATTIIISSFTIHILLLVSIPLTSSQSNENTTIVDQICKKTPFYDLCSSILNSNPLTPKTDLKTIAIVMVKNILSNATDTLNYIEGLIKKTSDRGMEQALAFCAESYIPVVKYTLPQATDAINQNRFAFASYCVNDAVKEINSCNKKFSGLTLVSPLGDRNGIVQKLVDVASAIIKQLLKG* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1177 183 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 180 IPR035513 -
Tpr5g1177 183 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 181 IPR035513 -
Tpr5g1177 183 CDD CIF_like 36 180 IPR034087 GO:0004857|GO:0043086
Tpr5g1177 183 TIGRFAM PME_inhib: pectinesterase inhibitor domain 11 180 IPR006501 GO:0004857
Tpr5g1177 183 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 12 183 - -
Tpr5g1177 183 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 183 - -
Tpr5g1177 183 Pfam Plant invertase/pectin methylesterase inhibitor 35 176 IPR006501 GO:0004857
Tpr5g1177 183 SMART PMEI_2 31 176 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1177 Tpr-Chr5 23213444 23214117 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1177 - - gmx:100527840 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1177 5 23213444 23214117 Tpr5g1177 5 23213444 23214117 ECH