Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1143 ATGGCTAGTTTGAGATTTTTCTGCACCACAAATATCTCAGCTGTCTCAACTCAACATAAAGTCAAAAACAATAACAAGTGTGTTCTTCATCAGAAAGTCAAGAACCTCATCAACAACACTTTGGAACTTCCTTCCATTTCATCATCATCGACTACTCCAATTGAGTCTCTCCATAAAGGCAATTGGGTCAAGCTCATTTGTGGTGCAAGCTTTGAAGATGTTGTTGATATCAGAAATCTCAGTTTGGTTTACACTCTTGCTGGAGTTGACTGCATTGACTGCGCTGCTGATGCATCGGTTGTTAGTGCTGTGAATGAAGGAATTCAAGCTGCAAAAGACATCTTATGCTGCCATAGAAGACCATGGGTGATGATCAGTGTTAATGATGATAAAGATCTTCATTTTCGCAAAGCCGAATTTGATCCGGAGGACTGTCCAGCCGACTGTTCACGCCCTTGTGAAAATGTGTGTCCTGCAAATGCAATCTCATTCCAAGAGAAATCTACTTTAGGAATTTCATATAATACCGAAGCATCAAGAGTAATGAAGGACGGTGTCATAACGGAACGCTGTTATGGCTGTGGTCGATGTCTTCCAGTTTGCCCATATGATAAAATAAGAGAGGTAACGTATGTTAGGGATGCTATTACAACTTCTGATTTGATCAAGAGAAATGATGTTGATGCTATAGAGATACATACAAGTGGAAGACAGAGTAGACAGTTCGAAGAACTCTGGCGTGCTTTAGGAGATTCGGTACAAAATTTGAAGCTAGTAGCCGTTAGTTTACCTAATGTTGGAGATTCGACAATATCATCTATGAACAAAATGTTCTCGATTATGAAACCAAATCTTAAAAGCTTCAACTTATGGCAGTTAGACGGCCGTCCAATGAGTGGCGATATTGGTAGAGGAGCAACTAAGGAGTCAATAGCCTTTGCTGTTCAATTAGCTCAAGCAAAAGATAGACCTCCCGGATTTCTTCAACTTGCTGGTGGAACTAATGCTCACACAATTGAAGGGTTGAAAAGAGAAGGACTCTTTCAAACAACAATCAGTCCATCTAATCCATCGTGTGCTTTAATTAGCGGCATAGCTTATGGTGGCTACGCGCGAAAGATTGTTGGTAGAGTATTGAGATCCATGCAATCCCAACATGGTGGAGCTGCTTCAATTGAGGATCATCCTGAGCATCTCTTAATGGCTCTAAGGGAAGCACTTGCTTTGGTTGGACCTGTTAAATGTCTATAA 1251 0.4085 MASLRFFCTTNISAVSTQHKVKNNNKCVLHQKVKNLINNTLELPSISSSSTTPIESLHKGNWVKLICGASFEDVVDIRNLSLVYTLAGVDCIDCAADASVVSAVNEGIQAAKDILCCHRRPWVMISVNDDKDLHFRKAEFDPEDCPADCSRPCENVCPANAISFQEKSTLGISYNTEASRVMKDGVITERCYGCGRCLPVCPYDKIREVTYVRDAITTSDLIKRNDVDAIEIHTSGRQSRQFEELWRALGDSVQNLKLVAVSLPNVGDSTISSMNKMFSIMKPNLKSFNLWQLDGRPMSGDIGRGATKESIAFAVQLAQAKDRPPGFLQLAGGTNAHTIEGLKREGLFQTTISPSNPSCALISGIAYGGYARKIVGRVLRSMQSQHGGAASIEDHPEHLLMALREALALVGPVKCL* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1143 416 Pfam Iron-Sulfur binding protein C terminal 221 411 IPR021039 -
Tpr5g1143 416 Pfam 4Fe-4S dicluster domain 148 204 IPR017896 -
Tpr5g1143 416 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 191 202 IPR017900 -
Tpr5g1143 416 SUPERFAMILY 4Fe-4S ferredoxins 126 215 - -
Tpr5g1143 416 PANTHER ATP-BINDING CASSETTE SUB-FAMILY E MEMBER 1 17 411 - -
Tpr5g1143 416 Gene3D - 129 256 - -
Tpr5g1143 416 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 136 167 IPR017896 -
Tpr5g1143 416 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 182 211 IPR017896 -
Tpr5g1143 416 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 17 411 IPR013283 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1143 - - gmx:100804088 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1143 5 22747681 22751203 Tpr5g1143 5 22747681 22751203 ECH