Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1142 ATGACTATCATAATGTCTTTTCATCTGTTCTTCCTCTGCATCATAATGCCCTTCCTTGTATTTTGTGATGTTGGAATGCATTCAGGTTCTTCAACACAAATTTTTCATTCTTACCATGAAGACAAAAATGGTTCCATAATAGCATCAGAAAAATCAGAACATTCAAATTCCACCTCAACAAAATTTTGGTTTCATGGTTCTTGCAGAAAAAGAGACATTAGTATCTCACAAAGCAAAGCTTCAACTACTGGAATTCCACAGTACATTGTGAATATTGTCAACACTTGTGTTTCTGGTTGTGCTCCTCATGATATCCATCTTCATTGTGGCTGGTTTGCTTCAGCAAGAATAATCAACCCTAAATTGTTCAAGAGACTCTCTTATGATGATTGTTTGGTGAATGGAGGGAAACCTTTGAGTTCTAGCCAGATTATTAGATTCACTTATTCTAATTCCTTTATGTACCCTCTTGCATTTAAGTCTGCTAGGTTTTGCTGA 498 0.3574 MTIIMSFHLFFLCIIMPFLVFCDVGMHSGSSTQIFHSYHEDKNGSIIASEKSEHSNSTSTKFWFHGSCRKRDISISQSKASTTGIPQYIVNIVNTCVSGCAPHDIHLHCGWFASARIINPKLFKRLSYDDCLVNGGKPLSSSQIIRFTYSNSFMYPLAFKSARFC* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1142 165 PANTHER PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED 11 165 IPR040361 -
Tpr5g1142 165 PANTHER PROTEIN TAPETUM DETERMINANT 1-LIKE 11 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1142 Tpr-Chr5 22710628 22712022 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1142 - - aprc:113852241 280.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1142 5 22710628 22712022 Tpr5g1142 5 22710628 22712022 ECH