Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1140 ATGGCAAGTGGAAGGAGATTGGGTGTAGCTGTGGATTTCTCACCATGCAGTGTCAAAGCATTGCAATGGACGGTGGATAATCTTGTCAGAGAAGGTGATAACATCATTCTTGTTATTGTTAGCCCAGAAGAGTATGAGCATGGTGAAATGCAGCTTTGGTCTGTTACCGGCTCACCTCTAATACCTCTAGCTGAATTCAATGACTCTACACTCTCAAAGAAATATGAAATCAAACCCAGCCCTGAAGTTATCAAAATCGCCACATCTGCCGTAGAGCAGAAAAAGGTTGTGGTGCATGTAAAGATCTATTGGGGAGATGCTGGTGAAAAATTATGTGAAGCAATTGAACAAATACCTCTAGATAGTCTTACCATGGGAAACAGAGGCCTTGGAACCATTAAAAGGGCTATAATGGGGAGTGTTAGCAACCATGTAGTGAATCATGCTACATGTCCAATTATTGTGGTGAAGACTCCAGACCACCAGCATTAA 492 0.4228 MASGRRLGVAVDFSPCSVKALQWTVDNLVREGDNIILVIVSPEEYEHGEMQLWSVTGSPLIPLAEFNDSTLSKKYEIKPSPEVIKIATSAVEQKKVVVHVKIYWGDAGEKLCEAIEQIPLDSLTMGNRGLGTIKRAIMGSVSNHVVNHATCPIIVVKTPDHQH* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1140 163 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 160 - -
Tpr5g1140 163 Gene3D HUPs 4 163 IPR014729 -
Tpr5g1140 163 PRINTS Universal stress protein signature 4 22 IPR006015 -
Tpr5g1140 163 PRINTS Universal stress protein signature 117 129 IPR006015 -
Tpr5g1140 163 PRINTS Universal stress protein signature 135 157 IPR006015 -
Tpr5g1140 163 PANTHER IMP2'P 5 162 - -
Tpr5g1140 163 CDD USP_Like 6 156 - -
Tpr5g1140 163 Pfam Universal stress protein family 5 157 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1140 Tpr-Chr5 22696042 22697909 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1140 - - gmx:100816534 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1140 5 22696042 22697909 Tpr5g1140 5 22696042 22697909 ECH