Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g1018 ATGGCTTCCACTATAGGTTGTGTGACACTAACCTTAAGCTTGGTTCTAGCTGTTTTATTTGCTCTCACGGTTCAAGTCTTCTACTTCTCACCTATAGATCCACTTTTGCTTGAAATACCACCTTCTGTATTTTCAATTTCTTCAACCAAAAACAACAAATTACAGAATGTGATTAAACTTGGAGAAGGGTTGAAGCAACCAGAAGATGTTTGTGTGGATAAAGATGGTGTTTTATATACAGCTACAAGAGATGGTTGGATTAAAAGAATGGTTAGGAATGGAAAATGGGAGAATTGGAAGCATATAAATAGCTCTACTTTGCTTGGAATCACGACATCAAAAGATGGTGGTCTCATTGTTTGTGATACTAGTTTGGGTTTGCTCAAAGTTACAGAAGAAGATGGTTTCAGTGTTATCCTTTCACAAGTAAATGGTTCTCAATTAATATTTGCGGACGATGTAATAGAAGCATCAGATGGGAATATATATTTCAGTGTTGGTAGTACTAAATTTAGTTTACACAATTGGCATCTGGATTTGCTAGAGGCAAGACCTAATGGACAACTTTTAAAGTACAATCCCATGTCAAATGAGACTGCTATTGTCCTTGATGATTTGTTTTTTGCAAATGGTGTTGCACTATCCAAGGATGAAGATTATCTTATAGTCTGTGAAACTTGGAAATTTAGGTGTGTGAGGAATTGGCTAAAAGGAATTAACAAAGGCAAAACAGATATCTTCATTGAAAACCTCCCTGGTGGTCCTGACAATATCAATCTTGCTCCTGATGGCTCATTTTGGATCGCTTTGGTTCAAATAACTTCAGAAAGGTTCGGTTTTGTGCACACCTCTAAGGTATGCAAGCACCTGTTAGCTTCATTTCCAAGGCTATTTAATCTTATCAATAGTGCAACAAAGTCAGCATTGGTGGTAAATGTCGGAACTGATGGCAAGATTATCAGAAAGTTTGATGATAATGAAGGGAAGGTCATTAGTTTTGTAACTTCAGCTGTGGAATTTGAGGACCATCTTTACCTAGGTAGTCTTCATTCCGACTTTGTCGGAAAATTACCACTGTGA 1080 0.3713 MASTIGCVTLTLSLVLAVLFALTVQVFYFSPIDPLLLEIPPSVFSISSTKNNKLQNVIKLGEGLKQPEDVCVDKDGVLYTATRDGWIKRMVRNGKWENWKHINSSTLLGITTSKDGGLIVCDTSLGLLKVTEEDGFSVILSQVNGSQLIFADDVIEASDGNIYFSVGSTKFSLHNWHLDLLEARPNGQLLKYNPMSNETAIVLDDLFFANGVALSKDEDYLIVCETWKFRCVRNWLKGINKGKTDIFIENLPGGPDNINLAPDGSFWIALVQITSERFGFVHTSKVCKHLLASFPRLFNLINSATKSALVVNVGTDGKIIRKFDDNEGKVISFVTSAVEFEDHLYLGSLHSDFVGKLPL* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g1018 359 PANTHER ABC TRANSPORTER PERMEASE PROTEIN-LIKE PROTEIN 13 357 - -
Tpr5g1018 359 Pfam Strictosidine synthase-like, N-terminal 50 90 - -
Tpr5g1018 359 Pfam Strictosidine synthase 156 238 IPR018119 GO:0009058|GO:0016844
Tpr5g1018 359 SUPERFAMILY Calcium-dependent phosphotriesterase 34 357 - -
Tpr5g1018 359 PANTHER STRICTOSIDINE SYNTHASE-RELATED 13 357 - -
Tpr5g1018 359 Gene3D - 47 358 IPR011042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g1018 Tpr-Chr5 20327765 20336142 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g1018 - - mtr:MTR_2g042430 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g1018 5 20327765 20336142 Tpr5g1018 5 20327765 20336142 ECH