Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0879 ATGGCTCCCAATAGTCGTGGGAAATCTGTCTCCCATATGTTACTGGAAGTTCCGGTAACATACTCTAAGACTGCGACACTTTTTGGAACACGCGGAATGGATGCAATGGCTGTGTTAGCTTCTGGTCAGGTGTATTCTGTGCCATGTCAGAAAAGGCTAACAGATGCAATGACTAAGGCCCACTCACATGTAGTCACTCGTCATGATAGGCAACGTTTCGCAGTGAAGGAAACTGAGGATCCCCGCGAAGGCCGACCAAAGGATACATTTAAAGTACACTTGGAAGAAAAATGGTGTGACTGTGGAAAATTTCAAGCATTACATTTACCTTGTTCACATGTTATTGCTGCTTGTTTTCACGCTCATTTGGACTATCAAGTGTACATTGATGATGTGTTCAAAGTTGCCAATGTATGCCGCGTTTATGAGAATACCTTCCAAGTGGTTCAAGGCCAAATGTATTGGCCGACATACGAAGGCCCGAAACTTTTTCCCCGTCCTGATATGAAAAGGGTCAAGAAAGGTCGTCCAAAAAAGAACCGCATTAGAACCGAAATGGACGAATTCGGCAAAAAAGAGCGCCTATGTGGTTTATGTAGAATGCCGGATCATAACAGAAATAATTGTCCTAATGTTGCGGGACCCTCGTCGTAA 654 0.4404 MAPNSRGKSVSHMLLEVPVTYSKTATLFGTRGMDAMAVLASGQVYSVPCQKRLTDAMTKAHSHVVTRHDRQRFAVKETEDPREGRPKDTFKVHLEEKWCDCGKFQALHLPCSHVIAACFHAHLDYQVYIDDVFKVANVCRVYENTFQVVQGQMYWPTYEGPKLFPRPDMKRVKKGRPKKNRIRTEMDEFGKKERLCGLCRMPDHNRNNCPNVAGPSS* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0879 217 SMART 26again6 97 124 IPR006564 GO:0008270
Tpr5g0879 217 Pfam SWIM zinc finger 88 121 IPR007527 GO:0008270
Tpr5g0879 217 ProSiteProfiles Zinc finger SWIM-type profile. 90 122 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0879 Tpr-Chr5 16650214 16650867 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0879 - - cam:105852965 203.756