Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0847 ATGGTAGCTATGGCCACCGCTAAGGGAATCGAAACCTTCGAAGTTTTCGCTAAAGTTCACGGAATTTTACTCGCCGCGTCGGGGTTACCGGAGTCACTTCACCGCCGTCTCTTCCAGAAACTCTCCACTGAAACCTTCGACGGCGGCGAACATTTCCAGATTGAGCCTTGTGAAGATAACCGCATGAGACGCCTCGTTTTGACGTCGGATTCCATGGCCAAAGACTCCAATGTCTTCCTCATTGATCATGCTTGGACTTTCAGACTCTCCGACGCTTACAAACAGCTGCGTGAAGTTCCGGGATTAGCAGAGAGGATGAGTTCGTTGATGTGTGTGGATATTGACACGAATTTGGATGGTGAAAATGAGATGAATGATGTTGATGATGAAGTTTCGAGAGAGAAGCTTGGTGTTGTGGAAATAGTTGAGAATGAGGTTCGAGAGGTAAAAGAGAAAGGTGATGGTACATTGAGATGGTTGGAGCTTGATGATCTTGACATTGATGATGATATGTTTCTTTCATTGGACTTACCTGCTAGATTTCCGAATTTAGTGGCACTTAGCCTATATGGAAACAAGCTTACAATAGCTGAACTGGTTGTTCAAGAAGTTACCAAATTTAAACATCTCAAAGGACTCTGGCTGAACAATAATCCGGTTGTTAAAAATTGTGATGGTGAGCTTGCAGATATTTTTCTCAAGGAATTACCAGAACTGGAGGTTTATAATTCAACTTTCACAAGCAATTTTGGGGAGTGGGCTTTGGGCTTTTGTGCAGACATATATGGAAAGGATAACCCAGTAAATGGTGATAAAGCTGACAGTCTGCTGCGGAGTGTATCTAATCTTGACCTTTCAAATAGAAATGTTCACAATTTGATTAACAAGGAATTTTCACCCAGTTGTTTGCCATCCCTTTCTTACTTGAACATACGTGGAAATCCATTGGAGCAAAACTCAGTTTCCAACTTGTTAGATCTGCTGAGGCAATTCCCTTGCTTACGTTCATTGGAGGTCGATATTCCCGGTCCTCTTGGAGGAAGTGCCATTGAAATTCTGGAATCTCTTCCAAACATTTCTGAAATAAATGGTATTTCTGCATCCAAAATATTGGAAACTGGAAAGCATGTTATTGATTCAATGCTTCTTCCCCGTCTTCCTGAATGGAGTCCTGATGAGCCTATCCATGACCGTATTATAAGTGCAATGTGGCTATATCTAATGACCTATAGACTTGCCGATGAAGAAAAGTTAGACGAAACCTCTGTATGGTATGTGATGGATGAATTCGGTTCTGCTTTGCGGCACAGTGATGAACCAAATTTTAGAGTGGCACCTTTTCTTTTCATGCCGGAGGGTAATCTGGCATCAGCTGTGAGCTTTTCTATTCTATGGCCAGCTCGAAATGTTCGGAAAGGCGATGAATGCACTCGTGACTATCTTCTTGGTATTGGGGAAGATAAACAGCGTTCTGCCAGACTTACTGCCTGGTTCCATACCCCAGAGAACTATTTTATCCAAGAGTATGAGAAGCACTATCAGAAATTGCAATCCACAAGTTTAATACCACCCACAGTCCAGTCTTCTGAAAGTAGAAGTATTCGTCCACATGATGGGCGTCCTTTACGGGTTTACACAGATATACCTCACGTGGAGGAGAACTTGACTCATCCTGAGTTTGCAATCATAAAGGACCCAAAAGATGCAGATATAATATGGACCTGTGTGCAGGTAGATGAGGAGATGAAAAAGGCCACAGGAATAACAGATCAACAGTACATTAATCAATTTCCATTTGAGGCTTGTCTTGTCATGAAACATCATTTAGCAGAGACAATTCAGAAGGCACATGGATCTCCTCAATGGTTGCAGCCTACTTATAATCTTGAAACTCATCTGTCTCAACTTATTGGTGATTATTGTATACGCAAAAGAGAAGGACTAGACAACCTTTGGATCTTAAAACCCTGGAACATGGCCCGAACTATTGATACTGCAGTAACTGATAATTTGCCAGCAATAATCAGACTAATGGAAACTGGTCCAAAAATATGCCAGAAGTATATTGAACAACCTGCTTTGTTCCAAGGGAAAAAGTTTGATCTCCGTTACATAGTACTGGTTCGGAGCATACACCCTTTGGAGATATTCCTGTCAGATTGTTTCTGGGTTAGGATAGCCAACAACCAATATTCTTTGGAGAAAAGTAGCCTCTTTGAGTATGAAACTCATTTCACTGTTATGAATTATCGTGGAAAAATAAACCACAAGAATATCAAGGATTTTGTGAGGGAATTTGAGGAAGAACATCAAGTTAAATGGTTGGATATACATACAAGAGTAAGGAATATGATTCGATCAGTGTTCGAGGCAGCTGCGGTTGCACATCCTGAGATGCATAGTCCAACATCAAGGGCAATGTACGGTGTAGATGTCATGTTAGACGGCTCTTTCCAACCTAAGTTATTAGAGGTGACTTACTGTCCTGATTGTACACGAGCTTGCAAATATGACATGGATATCGTTGTTGGAGATGGAGGTGTTGCTAAAGGTTGTGATTTCTTCAACAATGTGTTCAAGTGTCTCTTTTTGAATGAAATTTCTCAGGTTAGTCCATTGTAA 2622 0.4127 MVAMATAKGIETFEVFAKVHGILLAASGLPESLHRRLFQKLSTETFDGGEHFQIEPCEDNRMRRLVLTSDSMAKDSNVFLIDHAWTFRLSDAYKQLREVPGLAERMSSLMCVDIDTNLDGENEMNDVDDEVSREKLGVVEIVENEVREVKEKGDGTLRWLELDDLDIDDDMFLSLDLPARFPNLVALSLYGNKLTIAELVVQEVTKFKHLKGLWLNNNPVVKNCDGELADIFLKELPELEVYNSTFTSNFGEWALGFCADIYGKDNPVNGDKADSLLRSVSNLDLSNRNVHNLINKEFSPSCLPSLSYLNIRGNPLEQNSVSNLLDLLRQFPCLRSLEVDIPGPLGGSAIEILESLPNISEINGISASKILETGKHVIDSMLLPRLPEWSPDEPIHDRIISAMWLYLMTYRLADEEKLDETSVWYVMDEFGSALRHSDEPNFRVAPFLFMPEGNLASAVSFSILWPARNVRKGDECTRDYLLGIGEDKQRSARLTAWFHTPENYFIQEYEKHYQKLQSTSLIPPTVQSSESRSIRPHDGRPLRVYTDIPHVEENLTHPEFAIIKDPKDADIIWTCVQVDEEMKKATGITDQQYINQFPFEACLVMKHHLAETIQKAHGSPQWLQPTYNLETHLSQLIGDYCIRKREGLDNLWILKPWNMARTIDTAVTDNLPAIIRLMETGPKICQKYIEQPALFQGKKFDLRYIVLVRSIHPLEIFLSDCFWVRIANNQYSLEKSSLFEYETHFTVMNYRGKINHKNIKDFVREFEEEHQVKWLDIHTRVRNMIRSVFEAAAVAHPEMHSPTSRAMYGVDVMLDGSFQPKLLEVTYCPDCTRACKYDMDIVVGDGGVAKGCDFFNNVFKCLFLNEISQVSPL* 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0847 873 Gene3D Ribonuclease Inhibitor 258 369 IPR032675 -
Tpr5g0847 873 Gene3D Ribonuclease Inhibitor 102 250 IPR032675 -
Tpr5g0847 873 Gene3D - 668 846 - -
Tpr5g0847 873 SUPERFAMILY RNI-like 156 363 - -
Tpr5g0847 873 ProSiteProfiles TTL domain profile. 537 865 IPR004344 GO:0036211
Tpr5g0847 873 Pfam Tubulin-tyrosine ligase family 591 841 IPR004344 GO:0036211
Tpr5g0847 873 PANTHER TUBULIN--TYROSINE LIGASE-LIKE PROTEIN 12 4 872 IPR027749 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0847 K16609 - gmx:100809212 1475.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0847 5 15428829 15436329 Tpr5g0847 5 15428829 15436329 ECH