Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0824 ATGGCTGGAGTTACGAAGGAGGAAGAGTCGGGTTCGAGTAGTCCTAGTTGGGGTGCTGCTTCCTTTTTTATGCAGACAACGGAAGATGTGGCTAAAGCTGTTGCTGCTGCGATGAATGCTCCAAGGCCGTCTATTATATATTCATCCAAAAATGAACAGGGTGGTGGTAGTCAGCTTCAAAGGCTTCAGTATCAAGTTACGAAAATGATTAAAGGGTTTTCTCGTCCACCTGAAGTTAAATATACAAATTACAATCCGGAAATCTTGACTAGTCAGAAGCGTCAATGGGCTGCGAACTTTCATTTGCAGTACAATGATCATAGGTCTTGGAAGGAGCCAACAAAGTTGTTTGAAAGTATGGTGATTGTTGGACTTCATCCTAACTGTGACATTGATGCACTGCATAGCCAATGTTTAGATAAAAAGTTTGAGGACTCTGATAGTGATAGTGATAAATTCAGAAGTATACTTGGTTATCAGAATCAATCACGTGTGGAGCCTAATGTTGAACCTCAGGTCTTGTTCATTTACCCTCCAGAAAAGCAGCTACCTCTTAAAGAAAAGGATCTTCTTTCTTTCTGTTTCCCTGGCGGTCTTGAGGTTAATGCTGTTGAGAAAACCCCTTCGATGAGTGAATTGAACGAAATTCATTTCGGGCAGGAACACCTTAAACAAAGGGATCTGTCTTTTGTATTTAGGTTACAGGGTGCTGATAATTCAACACTTTATGGGTGTTGTGTCTTAGTTGAAGAGATAGTGCATAAACCCTCTGGATTGATTTCTATGGTTTCGGATAAGCGGTTATCTAACTCTTCTTTGAGACGCCATGTATTAACCACACAAAGATGTTACTGCATTCTCTCAAGGCTTCCATTTTTTGAGTTGCACTTTGGTGTATTGAACAGCATCTTCATGCAAGAAAGGCTAGAGCGGTTGTCAAAAAGCGTTGAATTTTTAAATTTAGAATCTGTTGAAGGGAGTTATGAGGAAGACAAACTTGACGAGAATTCAAGAATTTCTCAATCAAACCTAAGAAATTCTGTATCTAATAATATTGAGGGTGATAGTAATCATCTAGAGAAACAAATGGTCAATGAGGAGCTACATACACTTAAGGAGGGAGCAGATGATGATGATATTGTGCCTATTCATCCTGAAACTGATAGAAAAATCGCCAAACAAGAATCTGGCCCTACAGTTGCTGAAGACAGTAATATGTATGGCGATGCTTTGGTAACAAACAAACCGTCAGAAGATAGGCGCGTACCAACTTCTATCTTCCCTGTCCTGCGGAATTGGCAATATGAAAGCTCTGAGTCTTCATGCAGTTTTCAAGGATCACCTTGTGAAGATAGAAATTTTAGGAGTGATGCTGATGATACTGAGACAGAAGATGCTTCAATCTCGGGACAAGAGGATATAACTGACCTACATGAGATTCTTGAATGGGCCAAGGCAAATAATTGTGGACCATTACAAATTATTAGCGAGTATTATCGGTTTAGTTGCCCTACAAGGGGATCAACACTTATCTTTCATCCTCTGGAGCACCTTCATCCCTTGGAATATCACAGGCTAGATGATAATGCTCTTTATCTCTCTGGTTCGGCTGTTGATTTGAAATCCTGTAATACGGGTCTGGAATTAGTTGAGGCACAAAACTCTCTTCTGGTTGCAGAGGAGGCAACTGCGTTATCTATATGGGCTGTAGCGTGCTTATGTGGTACCTTAAGACTTGAACATGTGTTGACATTCTTTGCAGGAGCTCTACTGGAGAAACAGATAGTAGTTGTCTGTTCTAATTTGGGAATTCTATCTGCATCAGTTTTATCTGTTATTCCACTAATCCGACCCTACCAATGGCAAAGCCTGCTAATGCCGGTTTTACCAAATGACATGCTTGACTTTCTGGATGCTCCTGTCCCTTACATAGTTGGTGTGAGGAACAAGACAAGTGAAGTTCAGTCAAAGTTAAGCAATGTTATTCTGGTTGATACCAACAAAAACCAGGTGAAATCACCATCACTACCTCAACTGCCAAGACAGAAAGAGCTAATGTCTTCTTTACGTCCTTATCATACAACTCTTGTCGGAGAAAGTTACTTGGGTAGGAAAAGGCCGGTGTATGAATGCACTGCAATGCAGATAGAAGCTGCCAATGAATTCTTATCAATATTAAGGTCTTATTTGGATTCCCTTTGCGAAAACATCCGTTCACATACAATAACTAATGTACAATCCAATGACGATAAGGTATCCTTGCTTTTGAGGGAGAGTTTCATCGACTCATTCCCTTATCGTGATCAGCCTTTTATGAAGCTTTTCGTGGATACACAACTCTTCTCGGTACGCACAGATCTTGTTCTCTCTTTTTTCCAAAAGGAATAG 2388 0.4041 MAGVTKEEESGSSSPSWGAASFFMQTTEDVAKAVAAAMNAPRPSIIYSSKNEQGGGSQLQRLQYQVTKMIKGFSRPPEVKYTNYNPEILTSQKRQWAANFHLQYNDHRSWKEPTKLFESMVIVGLHPNCDIDALHSQCLDKKFEDSDSDSDKFRSILGYQNQSRVEPNVEPQVLFIYPPEKQLPLKEKDLLSFCFPGGLEVNAVEKTPSMSELNEIHFGQEHLKQRDLSFVFRLQGADNSTLYGCCVLVEEIVHKPSGLISMVSDKRLSNSSLRRHVLTTQRCYCILSRLPFFELHFGVLNSIFMQERLERLSKSVEFLNLESVEGSYEEDKLDENSRISQSNLRNSVSNNIEGDSNHLEKQMVNEELHTLKEGADDDDIVPIHPETDRKIAKQESGPTVAEDSNMYGDALVTNKPSEDRRVPTSIFPVLRNWQYESSESSCSFQGSPCEDRNFRSDADDTETEDASISGQEDITDLHEILEWAKANNCGPLQIISEYYRFSCPTRGSTLIFHPLEHLHPLEYHRLDDNALYLSGSAVDLKSCNTGLELVEAQNSLLVAEEATALSIWAVACLCGTLRLEHVLTFFAGALLEKQIVVVCSNLGILSASVLSVIPLIRPYQWQSLLMPVLPNDMLDFLDAPVPYIVGVRNKTSEVQSKLSNVILVDTNKNQVKSPSLPQLPRQKELMSSLRPYHTTLVGESYLGRKRPVYECTAMQIEAANEFLSILRSYLDSLCENIRSHTITNVQSNDDKVSLLLRESFIDSFPYRDQPFMKLFVDTQLFSVRTDLVLSFFQKE* 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0824 795 PANTHER DENN (AEX-3) DOMAIN PROTEIN 1 795 - -
Tpr5g0824 795 ProSiteProfiles Tripartite DENN domain profile. 151 795 IPR037516 -
Tpr5g0824 795 Pfam DENN (AEX-3) domain 567 668 IPR001194 -
Tpr5g0824 795 SMART DENN_cls 279 669 IPR001194 -
Tpr5g0824 795 SMART uDENN_cls 113 250 IPR005113 -
Tpr5g0824 795 MobiDBLite consensus disorder prediction 444 471 - -
Tpr5g0824 795 Gene3D - 106 321 - -
Tpr5g0824 795 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 1 795 - -
Tpr5g0824 795 Gene3D - 566 732 IPR043153 -
Tpr5g0824 795 Pfam uDENN domain 171 248 IPR005113 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0824 Tpr-Chr5 14913022 14925673 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0824 - - gmx:100782148 1218.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3454 2 37923672 37935011 Tpr5g0824 5 14913022 14925673 PCT