Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0821 ATGGCGTCCGTTTACATACCTGTTCAAAATTCAGAGGAAGAAGTTAGGGTTAATCTCGATCAACTTCCGAGGGATGCTTCTGATATCCTTGATATCCTCAAAGCTGAACAAGCTCCTCTCGATCTTTGGCTCATTATCGCTCGGGAGTACTTCAAGCAGGGAAAAGTTGATCAGTTTCGCCAGATTTTGGAAGAAGGATCCAGTCCAGAAATTGATGAATATTATGCTGATATTAGATATGAGAGGATTGCTATCTTAAATGCCCTTGGGGCTTACTATAGCTACCTTGGAAAAATAGAGACAAAACAAAGAGAAAAAGAGGAGCATTTCATTTTAGCAACACAATATTACAATAAAGCATCAAGGATAGACATGCATGAGCCCTCTACTTGGGTTGGAAAAGGTCAGCTTTTGTTAGCAAAGGGTGAAGTTGAACAGGCATCTTCTGCATTTAAGATTGTGTTAGAAGGAGATCGTGACAATGTTCCTGCTCTTTTAGGCCAGGCATGTGTCGAGTTCAACCGTGGAAAATATGCGGATTCGCTTGAGTTGTATAAGAGGGCATTGCAAGTGTATCCCAATTGCCCCGCAGCTGTGAGACTTGGCATAGGTCTATGTCGCTACAAATTAGGTCAATTTGAAAAGGCTCGACAGGCATTTGAGCGTGTTTTGCAGCTTGATCCAGAAAATGTCGAGGCTCTTGTTGCACTTGCAATAATGGACTTGCGCTCTAACGAAGCTGCTGGAATTAGGAAAGGAATGGTAAAAATGCAGAGGGCATTTGAGATTTACCCGTACTGTGCAATGGCTCTGAATTATCTTGCAAATCATTTCTTCTTCACTGGTCAACATTTTTTGGTCGAGCAACTGACTGAAACTGCATTATCTGTTACCAATCATGGTCCAACAAAGTCTCACTCTTATTACAATTTAGCACGTTCTTACCATAGCAAGGGGGACTATGATAAAGCTGGGGTGTATTACATGGCGTCTGTCAAGGAAATTAGCAAGCCCCATGAATTTGTGTTTCCTTATTATGGTTTGGGACAAGTACAAATTAAGTTGGGAGATTTTAGAAGTGCACTCTCAAACTTTGAAAAGGTTTTGGAGGTGTACCCAGATAATTGCGAGACATTGAAAGCTCTTGCTTACATATATGTTCAGCTTGGTCAGACTGACAAAGGCCATGAATTTATCAGGAAAGCTACAAAAATTGATCCCCGTGATGCCCAGGCATTTCTTGAATTAGGAGAATTGTTAATTTTGTCCGACACAGGTGCTGCACTGGATGCATTCAAAACTGCCCGTACTCTTTTTAAGAAGGGAGGTCAGGAAGCACCAATTGAATTACTCAACAATATTGGTGTCCTCCAGTTCGAAAGGGGAGAATTTGAGTTTGCTAAACAAACTTTTAAGGAAGCTCTTGGTGATGGAATTTGGCTTTCTTTCTTTAGTGAGGCAAATAAGTCTTCCATTGATGCTGCTACTTCTACTCTTCAATTCAAGGACATGCAATTATTTCATGACCTTGAAAGTAATGGTCAACTTGTTGAAGTACCATGGGATAAAGTCACAGTAATCTTTAACCTGGCCAGATTACTTGAGCAGTTAAATGAATCTGGAACTGCAAGCATATTATATCGTCTAATCTTGTTTAAGTACCCAGACTACATTGATGCGTATCTGAGGCTTGCTGCTATTTCAAAGGCTCGGAACAACATTCTATTAAGCATTGAACTGGTTAATGATGCCCTGAAGGTGAATGGCAAGTGTCCAAATGCATTATCTATGCTGGGTGAGTTGGAGCTGAAAAATGATGATTGGGTGAAGGCAAAAGAAACTCTCCGGGCAGCCAGTGACGCCACTGACGGGAAGGATTCATATGCTACACTTTCTCTAGGAAACTGGAACTACTTTGCTGCAGTTCGCAATGAAAAGCGTAATCCAAAGCTAGAAGCTACTCATTTGGAAAAGGCTAAGGAGCTTTATACCAAAGTTATGATTCAGCATTCTTCTAATTTATATGCTGCCAATGGTGCTGCAGTCGTTTTTGCAGAAAAAGGCCATTTTGATGTTTCAAAAGATATCTTTACGCAGGTTCAAGAAGCTGCCAGCGGTAGTGTTTTTGTCCAGATGCCTGACGTTTGGATAAATCTGGCCCATGTCTATTTTGCTCAGGGGAATTTTGCTTTGGCCGTCAAAATGTATCAGAATTGCTTGCGGAAGTTTTATCATAACACAGACTCACAAGTACTTCTATACTTGGCACGCACCTATTATGAAGCCGAACAGTGGCAAGACTGTATTAAAACTCTACAGAGAGCCATCCATTTAGCACCCTCAAACTACACATTAAGGTTTGATGCAGGGGTTGCAATGCAGAAGTTTTCAGCATCAACGCTTCAAAAGGCAAAGAGGACTGCAGATGAGGTGAGAGCAACGGTTGCAGGGCTGCAAAATGCTGTCCGTATATTTAGTCAGTTGTCTGCTGCTTCCAACCTACATATTCATGGATTTGATGAGAAGAAGATTGATACTCATGTTGGATACTGCACCCACTTACTTTCGGCTGCAAAAGTTCATCTTGAAGCAGCTGAGCGTGAGGAACAACAAATACGGCAGAGACAGGAAGTTGCACGTCAGGTTGCATTGGCTGAGGAAGCCAGGCGTAAGGCTGAAGAGCAAAGGAAAATCCAGATGGATAGGAGAAAGCATGAGGACGAGTTAAAAATAGTTCAAAAACAGGAGGAGCATTTTAAGCGTGTTAAGGAACAATGGAAGAGCAGCACACATTCAAAACGGAGGGAAAGGTCGGATGATGAAGATGGTGGTACTGCTGAGAAAAAGAAAAGAAAAGGTGGAAAGAGGAGGAAGAAGGATAAGCACTCAAAGTCACACAATGACACAGAAGAAATGGAGCCTGGAGAAATGGAGCCTGATATGATGGATGAACAGGAAATGGAGGATGAAGATGCTAACACAAACTACAGAGAGGAGCTCCAAACTGATACAAAGGATGTTGAGGAAAATCCCCATGGTCTTCTTGCATTAGCAGGACTTGAGGATTCTGATGCAGATGATGAGCCGGCCGCCGGACCTTCCTCAACCATTAGCAGGCGGAGGCAAGCATTATCAGAATCTGATGACGATGAACCGATAATGAAGCAACAAAGTCCTGTAAGAGAAAATTCTGTTGATATGGAGGAGAGTGATGGAGAGATCAGGGGTGGAGAGAAGACACATGGAGATGATGCCAGTGATGAGGAAAAATAA 3273 0.4219 MASVYIPVQNSEEEVRVNLDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKVDQFRQILEEGSSPEIDEYYADIRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKASRIDMHEPSTWVGKGQLLLAKGEVEQASSAFKIVLEGDRDNVPALLGQACVEFNRGKYADSLELYKRALQVYPNCPAAVRLGIGLCRYKLGQFEKARQAFERVLQLDPENVEALVALAIMDLRSNEAAGIRKGMVKMQRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALSVTNHGPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEISKPHEFVFPYYGLGQVQIKLGDFRSALSNFEKVLEVYPDNCETLKALAYIYVQLGQTDKGHEFIRKATKIDPRDAQAFLELGELLILSDTGAALDAFKTARTLFKKGGQEAPIELLNNIGVLQFERGEFEFAKQTFKEALGDGIWLSFFSEANKSSIDAATSTLQFKDMQLFHDLESNGQLVEVPWDKVTVIFNLARLLEQLNESGTASILYRLILFKYPDYIDAYLRLAAISKARNNILLSIELVNDALKVNGKCPNALSMLGELELKNDDWVKAKETLRAASDATDGKDSYATLSLGNWNYFAAVRNEKRNPKLEATHLEKAKELYTKVMIQHSSNLYAANGAAVVFAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAVKMYQNCLRKFYHNTDSQVLLYLARTYYEAEQWQDCIKTLQRAIHLAPSNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAGLQNAVRIFSQLSAASNLHIHGFDEKKIDTHVGYCTHLLSAAKVHLEAAEREEQQIRQRQEVARQVALAEEARRKAEEQRKIQMDRRKHEDELKIVQKQEEHFKRVKEQWKSSTHSKRRERSDDEDGGTAEKKKRKGGKRRKKDKHSKSHNDTEEMEPGEMEPDMMDEQEMEDEDANTNYREELQTDTKDVEENPHGLLALAGLEDSDADDEPAAGPSSTISRRRQALSESDDDEPIMKQQSPVRENSVDMEESDGEIRGGEKTHGDDASDEEK* 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0821 1090 Coils Coil 801 821 - -
Tpr5g0821 1090 SUPERFAMILY TPR-like 115 245 IPR011990 GO:0005515
Tpr5g0821 1090 ProSiteProfiles TPR repeat region circular profile. 342 375 - -
Tpr5g0821 1090 Gene3D Tetratricopeptide repeat domain 8 337 IPR011990 GO:0005515
Tpr5g0821 1090 Pfam Tetratricopeptide repeat 354 412 - -
Tpr5g0821 1090 SUPERFAMILY TPR-like 520 793 IPR011990 GO:0005515
Tpr5g0821 1090 MobiDBLite consensus disorder prediction 994 1010 - -
Tpr5g0821 1090 MobiDBLite consensus disorder prediction 915 949 - -
Tpr5g0821 1090 Gene3D Tetratricopeptide repeat domain 501 631 IPR011990 GO:0005515
Tpr5g0821 1090 MobiDBLite consensus disorder prediction 973 993 - -
Tpr5g0821 1090 SUPERFAMILY HCP-like 203 435 - -
Tpr5g0821 1090 Coils Coil 855 902 - -
Tpr5g0821 1090 ProSiteProfiles TPR repeat profile. 162 195 IPR019734 GO:0005515
Tpr5g0821 1090 Gene3D Tetratricopeptide repeat domain 344 500 IPR011990 GO:0005515
Tpr5g0821 1090 Gene3D Tetratricopeptide repeat domain 650 835 IPR011990 GO:0005515
Tpr5g0821 1090 ProSiteProfiles TPR repeat region circular profile. 197 230 - -
Tpr5g0821 1090 Pfam Tetratricopeptide repeat 306 333 IPR019734 GO:0005515
Tpr5g0821 1090 ProSiteProfiles TPR repeat profile. 197 230 IPR019734 GO:0005515
Tpr5g0821 1090 ProSiteProfiles TPR repeat profile. 749 782 IPR019734 GO:0005515
Tpr5g0821 1090 MobiDBLite consensus disorder prediction 915 1090 - -
Tpr5g0821 1090 SMART tpr_5 128 161 IPR019734 GO:0005515
Tpr5g0821 1090 SMART tpr_5 592 625 IPR019734 GO:0005515
Tpr5g0821 1090 SMART tpr_5 162 195 IPR019734 GO:0005515
Tpr5g0821 1090 SMART tpr_5 524 557 IPR019734 GO:0005515
Tpr5g0821 1090 SMART tpr_5 197 230 IPR019734 GO:0005515
Tpr5g0821 1090 SMART tpr_5 749 782 IPR019734 GO:0005515
Tpr5g0821 1090 SMART tpr_5 558 591 IPR019734 GO:0005515
Tpr5g0821 1090 SMART tpr_5 448 477 IPR019734 GO:0005515
Tpr5g0821 1090 SMART tpr_5 713 746 IPR019734 GO:0005515
Tpr5g0821 1090 SMART tpr_5 305 338 IPR019734 GO:0005515
Tpr5g0821 1090 SMART tpr_5 376 409 IPR019734 GO:0005515
Tpr5g0821 1090 SMART tpr_5 342 375 IPR019734 GO:0005515
Tpr5g0821 1090 ProSiteProfiles TPR repeat profile. 342 375 IPR019734 GO:0005515
Tpr5g0821 1090 MobiDBLite consensus disorder prediction 1042 1090 - -
Tpr5g0821 1090 Pfam Tetratricopeptide repeat 718 782 - -
Tpr5g0821 1090 Pfam Tetratricopeptide repeat 169 228 - -
Tpr5g0821 1090 ProSiteProfiles TPR repeat profile. 713 746 IPR019734 GO:0005515
Tpr5g0821 1090 PANTHER RNA POLYMERASE-ASSOCIATED PROTEIN CTR9 1 1049 IPR031101 GO:0006355|GO:0016570
Tpr5g0821 1090 ProSiteProfiles TPR repeat profile. 376 409 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0821 Tpr-Chr5 14845814 14861638 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0821 K15176 - gmx:100794371 1885.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0821 5 14845814 14861638 Tpr5g0821 5 14845814 14861638 ECH