Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0810 ATGAGTTTCATCTTCGGAAAGAGAAAAACTCCCGCAGAGCTTCTACGAGAAAACAAGAGGATGTTGGACAAATCAATTAGGGAAATTGAGCGGGAGAGGCAAGGTTTACAAACTCAAGAGAAGAAATTGATTGCGGAGATAAAGAAAAGTGCTAAACAAGGCCAGATGGGAGCTGTTAGAGTCATGGCAAAAGATCTTGTTCGAACAAGGCATCAGATTGAAAAGTTTTACAAGCTAAAATCACAGCTGCAAGGTGTATCACTTAGAATTCAGACATTGAAATCAACACAAGCAATGGGTGAGGCAATGAAAGGTGTGACAAAGGCCATGGGCCAAATGAATAGGCAGATGAATTTGCCAAATTTGCAAAAAATCATGCAAGAATTTGAAAGACAGAATGAGAAGATGGAACTGACGATGGAAGTGATGGGAGACGCAATAGACGATGCTTTGGAAGGGGATGAAGAAGAGGAAGAAACAGACGATCTTGTGAACCAAGTTCTTGATGAGATTGGAATTGACATAAACCAAGAGCTTGTAAATGCACCATCATCAGCTGTTGCTGCCCCGGCTGCAAAGACTAAGGTACCTCAAGTTGAAACTGCTGCGGCCGATGATAGCGGGATAGATAGTGATTTACAGGCAAGATTAGACAACTTAAGAAAAATGTAG 672 0.4152 MSFIFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLIAEIKKSAKQGQMGAVRVMAKDLVRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPNLQKIMQEFERQNEKMELTMEVMGDAIDDALEGDEEEEETDDLVNQVLDEIGIDINQELVNAPSSAVAAPAAKTKVPQVETAAADDSGIDSDLQARLDNLRKM* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0810 223 Gene3D - 6 181 - -
Tpr5g0810 223 Coils Coil 119 146 - -
Tpr5g0810 223 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2 HOMOLOG 1-LIKE 1 223 - -
Tpr5g0810 223 MobiDBLite consensus disorder prediction 186 207 - -
Tpr5g0810 223 Coils Coil 12 46 - -
Tpr5g0810 223 Pfam Snf7 17 186 IPR005024 GO:0007034
Tpr5g0810 223 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 1 223 IPR005024 GO:0007034
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0810 Tpr-Chr5 14407223 14412080 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0810 K12191 - gmx:100526885 365.54