Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0798 ATGCCCCATCGTAATAGTAACTCGTGGCACTCATCGCCACCGTTAATCAGTCCACCACTCCTCATCATTCTATTACCTATCCTCACCTTAACCCTCCTCTTCCTCACCGTCCCTCCCCTTCTCTCCGCCGTCAAAACAAGCAACTGGAACATGAACTCCCTCAACATTCTCCTCGTCGTTTTCGCCATCTTATTCGGAATTTTCTCTAGAAAAAACGACGACGATTCATCTTCTTCCAAGCAACAAATCCAAAACGACGCATTCCGCAGCGTTTCAGTTTCAGACACGCAACAATGGTATGGATTCTCTAGTGATGAGAGGAAAGTGTTTGATGAAAGTTCGAATCGGTTACAGTCACCGGTTACCGGTGTTAACCGGTTGAGAAGGAGTAGTAGTTCTTATCCAGATCTACGTCAGATAGAAACCGGTGATGACGGTTACAAGTTTCGTTTCTTTGATGATTTTGAAATCGAGAAACAGTTTCGTTCTCCGGTGAGAGCTACATTTTCTGTCTCGGACCACCGTAAACGGTTGCCGGAGTATCGAAGTAGACAAGAAGAACTACAAGAAGTTCATGTTAAGGAAATTCCGGTGGACACTTTTGAGATTCGTTCGTCTTCTCCGGTGAAGTCACGTTCACCTCCTTCGCCACCGCCACCTCCGCCGGTTTTATCTCGGCGTCATTCGAATCAGATGCATCGGAGTGTGGAGAGTAGGAGTGAGATAACTGAGGTTGAAGATCTCGAGTTCACGAGGTTAGAGTCTCGGCCGCATGATCCTCCGCCGCCGTTGTCGCCGTCGCCTCCACGGTTGTCGGCGAAGACACGATCGGAGAAGACGGAGCGAAGGAAGAGTAATGTGAAGAGAGAGATAGCAATGGTTTGGGCTTCGGTACTTTCTAATCAGAGAAAGCGAAAGAAGAAGCAGAGACCGAAAAATGATCACAATCACCGTTATGATAATGTTGAGGAATTAACAAACAACACGATGGCTGCACCGATGACTCCGCCGCCTCCTCCGCCACCCCCACCTTCAGTTTTTCATAGTATATTCAGAAAAGGACTTGGTAAGAACAAGAAAATTTATTCAGTACCGGCGCCGCCTCCTCCTCCGCCGTCCAGGAGATCGTCTAGGCTAAAGAATCAAATCCCTCCGCCACCGCAGACTCCTCCACCGGCATTACCACGCCGGAGAAATAACACGAAGCCGCCATTACCAAACAAATCAAGCAATTTCAACGAGACATTAAACTCCGGCAACCAGTCACCACTGATCCCTGTTCCGCCACCTCTACCGCCGTTCAAGCTGCCGGCGATGAAGTTTGTGGTTCGGGGTGATTTTGTTAAGATACAAAGTAACCAGAGTTCGCGAAGTACTTCGCCTGAACGGGAGCACATTGATGTGGAAGTTTCAGAAGCCACAGCTGTTACTAACACCGTTATGAATCACAATGGCAATGTTGGTGAGTCGGTTTTTTGTCCCAGCCCCGACGTGAATGCGAAGGCAGCGACATTCATTGCTCGTCTCAGGGGAGAATGGAAGCTGCAAAAGCTTAACTCCATCAAGGAGAAAGGCAATGCCTCATTGCCTCTTGCAAGAGATTAA 1605 0.4841 MPHRNSNSWHSSPPLISPPLLIILLPILTLTLLFLTVPPLLSAVKTSNWNMNSLNILLVVFAILFGIFSRKNDDDSSSSKQQIQNDAFRSVSVSDTQQWYGFSSDERKVFDESSNRLQSPVTGVNRLRRSSSSYPDLRQIETGDDGYKFRFFDDFEIEKQFRSPVRATFSVSDHRKRLPEYRSRQEELQEVHVKEIPVDTFEIRSSSPVKSRSPPSPPPPPPVLSRRHSNQMHRSVESRSEITEVEDLEFTRLESRPHDPPPPLSPSPPRLSAKTRSEKTERRKSNVKREIAMVWASVLSNQRKRKKKQRPKNDHNHRYDNVEELTNNTMAAPMTPPPPPPPPPSVFHSIFRKGLGKNKKIYSVPAPPPPPPSRRSSRLKNQIPPPPQTPPPALPRRRNNTKPPLPNKSSNFNETLNSGNQSPLIPVPPPLPPFKLPAMKFVVRGDFVKIQSNQSSRSTSPEREHIDVEVSEATAVTNTVMNHNGNVGESVFCPSPDVNAKAATFIARLRGEWKLQKLNSIKEKGNASLPLARD* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0798 534 PANTHER COTTON FIBER (DUF761) 7 524 - -
Tpr5g0798 534 MobiDBLite consensus disorder prediction 202 429 - -
Tpr5g0798 534 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 7 524 - -
Tpr5g0798 534 MobiDBLite consensus disorder prediction 383 399 - -
Tpr5g0798 534 MobiDBLite consensus disorder prediction 230 256 - -
Tpr5g0798 534 MobiDBLite consensus disorder prediction 211 225 - -
Tpr5g0798 534 MobiDBLite consensus disorder prediction 274 289 - -
Tpr5g0798 534 MobiDBLite consensus disorder prediction 402 422 - -
Tpr5g0798 534 MobiDBLite consensus disorder prediction 332 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0798 Tpr-Chr5 13944461 13946866 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0798 - - mtr:MTR_2g040580 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0798 5 13944461 13946866 Tpr5g0798 5 13944461 13946866 ECH