Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0797 ATGATGATGGGTGAAAACAGAGGAAGTAATACTAATAATGATGATGATGAGAAGGTGGAAGTGAATATATATCCTCTTAATTCTTACTATTTTGGATCCAAAGATTCTATTCCTTCTAAAGATCATTCACTTCATCATCGTCTTCGAAGGATCAAATCCAACTTTGATGCCCGTGGAATGCGAATTTGTGTGGAAGCTGTTATGATGGTTGAATTGTTCAAACATCCTCATTTGTTGCTGTTTCAAATAAAAAATTCCATCTTTAAACTTCCCGGTGGCCGTTTAAGGCCAGATGAATCAGATATCGATGGATTGAAGCGTAAGCTCGCAAGGAAGCTTTCTCTCGATGAAGATGGTGTTGGGGCGGAATGGGAGGTGGGAGAGTGCCTTGGAATGTGGTGGAGACCTGATTTTGAAACATTAATGCACCCCTTCTTACCACCTAATGTCAAACATCCAAAGGAGTGTACGAAACTCTTCCTTGTAAAGCTTCCGGAAAGTCGAAGGTTCACTGTGCCAAAGAACATGAAGTTGCTTTCAGTCCCATTGTGTCAAATTCGTGAAAATCAAAAGACATACGGGCCAATTATATCTGCGGTACCGCAGCTACTCCAAAAATTCTCTTTCAACATGATTGGAATTTAA 645 0.4016 MMMGENRGSNTNNDDDEKVEVNIYPLNSYYFGSKDSIPSKDHSLHHRLRRIKSNFDARGMRICVEAVMMVELFKHPHLLLFQIKNSIFKLPGGRLRPDESDIDGLKRKLARKLSLDEDGVGAEWEVGECLGMWWRPDFETLMHPFLPPNVKHPKECTKLFLVKLPESRRFTVPKNMKLLSVPLCQIRENQKTYGPIISAVPQLLQKFSFNMIGI* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0797 214 PIRSF CPSF-25 1 213 IPR016706 GO:0003729|GO:0005849|GO:0006378
Tpr5g0797 214 PANTHER PRE-MRNA CLEAVAGE FACTOR IM 25 KDA SUBUNIT 1 9 212 - -
Tpr5g0797 214 PANTHER PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT 9 212 IPR016706 GO:0003729|GO:0005849|GO:0006378
Tpr5g0797 214 SUPERFAMILY Nudix 60 166 IPR015797 -
Tpr5g0797 214 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 19 211 - -
Tpr5g0797 214 Pfam Nucleotide hydrolase 20 207 IPR016706 GO:0003729|GO:0005849|GO:0006378
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0797 Tpr-Chr5 13927891 13932828 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0797 K14397 - gmx:100791216 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0797 5 13927891 13932828 Tpr5g0797 5 13927891 13932828 ECH