Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0761 ATGGTGGTTAGGATTCGGCTATCACGTTTAGGATGCAAAAATAAACCATTCTATCGTGTCATGGCTGCCGATAGCAGATCTCCGAGAGACGGTAAACATCTCGAAGTTCTCGGTTACTACAATCCTCTACCTGGTCAAGATGGTGGCAAAAGAATGGGTATCAACTTTGATAGAGTCAAGTATTGGCTTTCTGTTGGAGCTCAACCGTCGAATCCTGTTGAGCGTCTTCTGTTTCGAGCTGGGCTACTTCCTCCACCACCGACTGTGGCTATGGCGCGCAAAGGTGGACCACGCGACACACGTCCTGTTGATGCTTTAACCGGCCGTGTCATTGGTGAACAGAAGCCTTCTAATTCCAACAAGTGA 366 0.4836 MVVRIRLSRLGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGINFDRVKYWLSVGAQPSNPVERLLFRAGLLPPPPTVAMARKGGPRDTRPVDALTGRVIGEQKPSNSNK* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0761 121 MobiDBLite consensus disorder prediction 87 121 - -
Tpr5g0761 121 PANTHER 30S RIBOSOMAL PROTEIN S16 1 110 IPR000307 GO:0003735|GO:0005840|GO:0006412
Tpr5g0761 121 SUPERFAMILY Ribosomal protein S16 3 94 IPR023803 -
Tpr5g0761 121 PANTHER 30S RIBOSOMAL PROTEIN S16-LIKE 1 110 - -
Tpr5g0761 121 TIGRFAM S16: ribosomal protein bS16 3 82 IPR000307 GO:0003735|GO:0005840|GO:0006412
Tpr5g0761 121 Hamap 30S ribosomal protein S16 [rpsP]. 2 80 IPR000307 GO:0003735|GO:0005840|GO:0006412
Tpr5g0761 121 Pfam Ribosomal protein S16 9 70 IPR000307 GO:0003735|GO:0005840|GO:0006412
Tpr5g0761 121 Gene3D - 1 113 IPR023803 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0761 Tpr-Chr5 13115910 13117544 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0761 K02959 - gmx:100499851 231.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0761 5 13115910 13117544 Tpr5g0761 5 13115910 13117544 ECH