Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0719 ATGGCAAGGTCAATAGTAGATTTCACAGTACAAAAAATCAGTGATTTGCTCATTGATGAAGCTGTGTTCTTATATGGTGTTAAAGACAAAGTGCAGAATCTTAAAACTGAGTTAAGAATGATGGAATCTTACTTACAAGATGAAGATAGAAAGCAAGAAGAAAATGAATCTCTCAAGAATTGGATTTCAGAAATAAGAGAAGCAGCTTATGATTCTGATGATGTAATTGAAGCATATGTCTTAAAAAGTGCTTCAAGAAGAAACAACATGACAGGTACCTTAAACAGAATAAAAAGTTATGTTTCAATTATCAATAGGTTAATAGAAATTCATCGAGTCGGTTATCAGGTTAATGAGATTATTTCTAGGATAACTAGTCTCACAAGAAATTTAGAAACTTTTGGCATAAAAAGTGAAAGTGGAGAAGCTTCAAATTCAATACATGGTAGAAACAAAGCTTTGAGAAGATCTTATTCTCATGTTATTGAAGAAGATATCATTGGTGTTGAAGATAATGTTAAGATTTTGGAGTCATGTTTGGTTAATAACAACAATAATGGATACAAAATTGTTGCTATTTGGGGTATGGGAGGTTTAGGAAAAACAACATTGGCTAAGAAGGTTTATCATAGTACTAATGTTAGGCAAAGTTTTGAGAGCTTAGCTTGGGCTTATATATCACAACATTGTCAAGCAAGGGATGTTTGGGAAGGAATTTTGTTTAGGCTTTTATCGCCTTCTAAGGAGTTACATGAAGAACTTGTGAATATGCGAGACGAGGAAGTTGCGAAAAAGCTTTATCAAGTACAAGTGGAGAAAAAGTGTTTGGTTGTTCTTGATGATATTTGGAGTGTTGATACTTGGAATAATTTGAGTCCTGGTTTTCCAGCCGGGATATCTTCGTCTGTTGTTGGTAGTAAAATATTGCTTACTACTAGGAATACTGATGTTGCATTGTTTATGGATCCTAATTGTTATCGTCATAATCCGAGGTGTTTGAATGAAGATGATAGTTGGGAGTTGTTTCAGAAAAAGGCTTTTCCAAAATATGATGATCCAGACTCGAGAATCAGCACAGAGATGGAGAAATTGGGAAGAGAAATGGTTGGAAGATGTGGAGGTTTACCTCTAGCCATAATAGTCCTTGGAGGACTATTAGCATCAAAGCCAACATTTTATGAATGGGACACAGTTAGACAGAACATCAATTCATACCTAAGAAAAGCAAAAGGCAAAGAACAACATTTAGGAGTATCAGAAGTACTAGCTTTAAGCTATTATGAATTACCCTACCAATTGAAACCATGTTTCCTACATTTAGCACATTTCCCTGAAAACCAAGAGATACAAACAAAGAAACTAACAAGAACATGGGTGGCAGAAGGTATCATATCACTAGTCCAAAACACCGGAGACAGCGAGGAAGCTCTCGAGGACGTGGCACAACGTTACTTGACGGAACTCGTCGAAAGATGTATGATTCAGGTAGTTGAAAAGAGTTCAACAGGAAGAATTAGAACAGTACAAATGCATAACCTCATGAGGGATCTTTGTGTGTCTAAGGCTTATCAAGAAAACTTTCTTGACATGATTGATTCGCGGAATGTGGACCAAACTAGTACCTCGAAAGCAAGGCCAACCGGTGAAGTTCGAAGAATCGCATTATATCTTGATCAAGATGTTGATAGTTTCTTGCTTCACAAGTTAAAAAGCCACAAACATCTTAGGTCTATAATTTGCTACCACGATAAAACAGCTAGGTTAAGTGAATGGCGTTCGATGAAATCAGTTTTCAAAAAATGCAAGTTACTTAGGGTTTTGAATTTGGAAGGAATACAATGTCAAATGGGAAAATTACCTAAAGAAATTGGTTACTTAATCCATTTAAGGTTTCTAAGTCTAAGAAACACAAAAATTGATGAGTTGCCAAATTCAATAGGAAATTTAAAGTGCTTACAAACCTTAGATCTTCTCACAGGAAACTCAACTGTTCAAATACCAAATGTAATAACAAACATGGAAAACTTGAGACATTTATATCTTCCTGAATCATGCGGCAACGACGTCGAGAAATGGCAACTATCCAATCTGAAAAACTTGCAAACTTTGGTTAACTTTCCTGCAGATAAATGTGATGTAAAGGATCTCATGAAACTAACCAATTTAAGAAAATTGGTAATAGATGATCCTAACTTTGGAGAAATCTTCAAAAGTACGAAAGTAACCTTTAACCATCTTGAGTCATTGTTTTATGTTAGTTCTGATGAAATTTCAATTCTAGAAGTTTCTGCAGGGTGTCCTAATCTATACAAGCTTAACATTGAAGGGCCTATAAGTAATTTCCCTCAACCAAACGAAATTTCGTCAAAACTTGCTAAACTCAAATTACAAGGTTCTGGTCTTGTTGATGATCCAATGATAACATTAGAGAAGCTTCCAAATTTAAGGTTACTTGAGCTACAACTTGATTCATTTTTAGGGAACAAAATGGTTTGTTCAAGTAATGGTTTTCCTCAGTTACGGTCACTTGTTTTGAGTGATTTGTCGAATCTCGAAGAGTGGAAATTGGAGAAAGGTGCTATGACTTGCCTTAGTAAACTTGAGATTTCTAATTGTACTAAGCTTGAGGTTGTTCCTGAAGGGATTAGGTTTGTGATTAGTCTTAAGGATTTGGAGATTAGATCAATGTTTGCAGCATTTAGAATCAAACTTGAAAAAGGTGGTGATGAACATTACAAAGTTCAACATGTTCCATCTTTGGTTTTTCGTTATTGTGATTATTAG 2784 0.3509 MARSIVDFTVQKISDLLIDEAVFLYGVKDKVQNLKTELRMMESYLQDEDRKQEENESLKNWISEIREAAYDSDDVIEAYVLKSASRRNNMTGTLNRIKSYVSIINRLIEIHRVGYQVNEIISRITSLTRNLETFGIKSESGEASNSIHGRNKALRRSYSHVIEEDIIGVEDNVKILESCLVNNNNNGYKIVAIWGMGGLGKTTLAKKVYHSTNVRQSFESLAWAYISQHCQARDVWEGILFRLLSPSKELHEELVNMRDEEVAKKLYQVQVEKKCLVVLDDIWSVDTWNNLSPGFPAGISSSVVGSKILLTTRNTDVALFMDPNCYRHNPRCLNEDDSWELFQKKAFPKYDDPDSRISTEMEKLGREMVGRCGGLPLAIIVLGGLLASKPTFYEWDTVRQNINSYLRKAKGKEQHLGVSEVLALSYYELPYQLKPCFLHLAHFPENQEIQTKKLTRTWVAEGIISLVQNTGDSEEALEDVAQRYLTELVERCMIQVVEKSSTGRIRTVQMHNLMRDLCVSKAYQENFLDMIDSRNVDQTSTSKARPTGEVRRIALYLDQDVDSFLLHKLKSHKHLRSIICYHDKTARLSEWRSMKSVFKKCKLLRVLNLEGIQCQMGKLPKEIGYLIHLRFLSLRNTKIDELPNSIGNLKCLQTLDLLTGNSTVQIPNVITNMENLRHLYLPESCGNDVEKWQLSNLKNLQTLVNFPADKCDVKDLMKLTNLRKLVIDDPNFGEIFKSTKVTFNHLESLFYVSSDEISILEVSAGCPNLYKLNIEGPISNFPQPNEISSKLAKLKLQGSGLVDDPMITLEKLPNLRLLELQLDSFLGNKMVCSSNGFPQLRSLVLSDLSNLEEWKLEKGAMTCLSKLEISNCTKLEVVPEGIRFVISLKDLEIRSMFAAFRIKLEKGGDEHYKVQHVPSLVFRYCDY* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0719 927 PRINTS Disease resistance protein signature 190 205 - -
Tpr5g0719 927 PRINTS Disease resistance protein signature 269 283 - -
Tpr5g0719 927 PRINTS Disease resistance protein signature 372 386 - -
Tpr5g0719 927 PRINTS Disease resistance protein signature 859 875 - -
Tpr5g0719 927 Pfam Rx N-terminal domain 6 88 IPR041118 -
Tpr5g0719 927 Gene3D - 332 424 IPR042197 -
Tpr5g0719 927 Pfam NB-ARC domain 170 426 IPR002182 GO:0043531
Tpr5g0719 927 CDD RX-CC_like 4 129 IPR038005 -
Tpr5g0719 927 SUPERFAMILY L domain-like 509 895 - -
Tpr5g0719 927 Gene3D - 425 522 IPR036388 -
Tpr5g0719 927 Gene3D - 5 114 - -
Tpr5g0719 927 PANTHER DISEASE RESISTANCE RPP8-LIKE PROTEIN 3-RELATED 16 896 - -
Tpr5g0719 927 Coils Coil 31 51 - -
Tpr5g0719 927 Gene3D Ribonuclease Inhibitor 537 907 IPR032675 -
Tpr5g0719 927 Gene3D - 152 325 IPR027417 -
Tpr5g0719 927 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 440 IPR027417 -
Tpr5g0719 927 PANTHER DISEASE RESISTANCE PROTEIN RP 16 896 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0719 Tpr-Chr5 12081768 12085879 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0719 617 704 Receptor kinase-like Gene Family AT3G28890 40.449 1.57e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0719 - - gmx:100305356 1334.7