Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0690 ATGGCTTTTGTACAAGAATCTTTGCATCTTCTATTGTTTTTTTTATCCCTATCAACATGTTGTTTGCCATCAATTAGCACCACTTATACAACAATAGCTCCTTCACCTTCCAAAACTCATAGATTGGTTTCAAAACTCATTCATTATAATTCAATTCACCATCCTAGCTACAATCCAAACAAAACAGCCAAAGAAAAAATGGAACTCAACATCAAACACTCGATTACGCGTTTAGCCTACTTGAAAGCAAGGATTGAAGGTTCGTTAGTCTCTAATAATAGTTATAGATCATCTCTTTCTCCATCATTAAACGGTAGAACCATACTAGCCAATCTCTCGATAGGCCAACCTCCCATCCCACAATTACTCATCATGGACACCGGAAGTAGCACCTTCTGGACAATGTGCACCCCTTGCACAAGTTGTACCCAATATCCAGGTCAAATTTTCAATCCTTCAAAGTCGTCCACCTATTCTCCATCATGCAATGAACCATGTTACTTTGACGAGTACTGCAAATGTGAGCTGGCGACGTACAGTGCCAGTTACGCAGACAAATCCTTCTCATCAGGAACAATTGGCAGTGACATGCTAGTCTTTGAGACGGGTGACGAAGGTATCGCCCAATTACCCAATATAGAATTCGGGTGTGCTCATGACATTATATATAATCATGATCCAAGCTACAACGGAGTACTAGGGTTAGGATTTGACGGTGGACGTTTGTCTTTGGTCACACAAATAGGTCCAAAATTCTCTTACTGTATAGGTAGCTTAACCGACAAGCATTATAATTACAACCATTTAATATTAGGTGAAGGAGCAAATCTTGAAGGTTATACTACACATTTAGAAGTGCATCATGGATACAACTATTTAACTATGGAAGGCATAAGTATAGGAGAAAATTGTCTTGACATAGACCCAAGTACTTTTGAGATCAAAGAGAATGGTACAGGTGGAGTTATCATTGATACAGGAAGTCCATTCTCCTATTTTGTTGATGATGTGTATAAATTACTATATAATGAAATTCAAAATCTATTTCGAGGGTCACTTCGACAAGTTAAAGTTCGAAAATTTCCATGGATGCTTTGTTACTTTGGGATTGTAAGTAAGGACCTGACAGGATTTCCAGTGGTTACATTCCACTTGGCTGGAGGAGCAGATTTAGTTTTAGATTCATTAAGCTTTTTTGAACAAACGGGGGATGATTTGTTTTGTATGGCTGTAGGTCCTACCAGTGAGTTTGGCATTGATGTTTCAGTTATTGGGTTATTAGCTCAACAGAGTTACAATGTGGGATATGACAATGTTAATGGACTTATTTACTTCCAAAGAATTGATTGTGAACTTCTTAGTAGCTGA 1368 0.3808 MAFVQESLHLLLFFLSLSTCCLPSISTTYTTIAPSPSKTHRLVSKLIHYNSIHHPSYNPNKTAKEKMELNIKHSITRLAYLKARIEGSLVSNNSYRSSLSPSLNGRTILANLSIGQPPIPQLLIMDTGSSTFWTMCTPCTSCTQYPGQIFNPSKSSTYSPSCNEPCYFDEYCKCELATYSASYADKSFSSGTIGSDMLVFETGDEGIAQLPNIEFGCAHDIIYNHDPSYNGVLGLGFDGGRLSLVTQIGPKFSYCIGSLTDKHYNYNHLILGEGANLEGYTTHLEVHHGYNYLTMEGISIGENCLDIDPSTFEIKENGTGGVIIDTGSPFSYFVDDVYKLLYNEIQNLFRGSLRQVKVRKFPWMLCYFGIVSKDLTGFPVVTFHLAGGADLVLDSLSFFEQTGDDLFCMAVGPTSEFGIDVSVIGLLAQQSYNVGYDNVNGLIYFQRIDCELLSS* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0690 455 Gene3D Acid Proteases 275 454 IPR021109 -
Tpr5g0690 455 CDD pepsin_A_like_plant 109 450 IPR034161 -
Tpr5g0690 455 Gene3D Acid Proteases 91 272 IPR021109 -
Tpr5g0690 455 Pfam Xylanase inhibitor C-terminal 292 446 IPR032799 -
Tpr5g0690 455 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 31 452 - -
Tpr5g0690 455 SUPERFAMILY Acid proteases 109 450 IPR021109 -
Tpr5g0690 455 Pfam Xylanase inhibitor N-terminal 110 272 IPR032861 -
Tpr5g0690 455 ProSiteProfiles Peptidase family A1 domain profile. 108 446 IPR033121 -
Tpr5g0690 455 PANTHER OS07G0603500 PROTEIN-RELATED 31 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0690 Tpr-Chr5 11566536 11567918 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0690 112 453 Miscellaneous Gene Families AT1G44130 25.745 1.95e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0690 - - gmx:100779317 539.265