Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0679 ATGGGATGTTCACAATCGAAGCTAGACGATGAAGAGTCGGTTCAGCTTTGTAAAGATAGAAAAAGGTTCATCAAACAAGCTGTTGAGCAAAGAACTCGGTTCGCAACTAGTCATATAGCTTATATTGAATCTATGAAAAGAGTTTCCGCTGCTCTTCGTGATTATATTGAAGGTGACGAGCCTCGGGAGTTCTCTTTAGACTCGGTTATTACACCGCCTTTTACGCCTGTGAAGAAGAGAACTAACCGTAGCATTGGCAATGGTAATAGCAATGGTAATGGTAATGACTTCATTCCTATATCGGCAAAATCTTTCACACCATCGACTATTGAGTTTGGAGTTGGACCAAATTCTAATTTGAGAATGAATTACTTTAGGCCGAGTGGTAATCCGGTAATTTCAGTTGAGGAAAGAGCTCCGGCACCTGAAACGGTTCGAATTGAAACGTATTCACCAATGCAGCAGCATTATGGCATGGATGGTTATTTTACAATGCAATCACCGCCTATGAATCCTTCGATTTTTCCTTATTCTCCTCCTAATGTTAGGTCTAATATCCCTCCACCTTCACCTCAAAATCCTCAATGGGATTTCTTTTGGAACCCTTTTTCGTCGTTTGATTACTATGGTTATCCAAGCCGAAGTAGCCTCGATCAAACTGGTATCGATGATGAATATCGAGAACTAAGACAGGTTCGAGAAGAAGAGGGAATACCGGACCTTGAAGAAGATGAAACTGAACAAGAAGATTATGTTCGGAAGAGAAATGTAGTAGAAGAAAGAACAAGAAATGTAGTAGAAGGAAGAACCAGAAATGTCGTAGAAGGAAGAACCAGAAATGTTGTAGAAGAAAGAACTAGAAATGTTGTAGAAGGAAGAACTAGAAATGTCGTAGAAGAAAGAACTAGAAATGTAGTTGAAGAAAGAACTAGAAATGATGTAAAATTCTCCAAAGAAGAAGTCGTTGTTGAAGATATTGATGACGATGATGAGGAAGAGGAGGATGATGAAGAGTGTGAAGAAGGGGGAACAGACGATGAAACCGAAACAGAAACCGAAATCGAGCACGATGCCAAGGATTCACAACAAGTCCATGGCAATGCAAGTTTTGAAGTATCGAAAAATCAAGCGGCAGGTCATATTGAATCCAGCCATAGAGAAATGGCAATTGGTAAACAAGAAGCCAAGGAAGAGATGGCAGGTTTTACCGTTTATGTTAACCGAAGGCCAACCAGCATGGCAGAAGTTATCAATGATCTTGAAGCTCAGTTCAAAACTGTGTGCAATGCAGCTAATGATGTCTCCGTTTTGTTAGAGTCTAAGAAAGCTCAGTATTTATTAACATCTCATGAACATTCAGCATCAAAATTATTGAACCCTGTCGCTATGTTCCGGTCAGCTTCTTCGCGCTCATCTTCGTCAAGATTTTTAGCGAATTCTTCAAGCACTAGGATGGAAAGTTATGAGGGCAGTAAGGATATCTCAGATGAACATTGTAGGCTTTCTGGTAGTCATCAATCTACATTGGACAAATTGAATGCATGGGAGAAGAAGCTCTATGAGGAAGTCAAGGCTGGAGAACGAATCCGAATCGCTTACGAGAAAAAATGCAAGCAACTAAGCAACTATGAAGTAAAAGGAGAGGACCCTTCTGCAGATAAAACAAGAGCAGCCATTAGAGATCTAGATACTCAGATAACAGTTTCAATACACTCAGTTGAAGCTATTTCCCGGAGAATCGAAACTCTAAGGGACAAAGAGTTGCATCCCCAACTTCTTGAATTAGTACAAGGGCTTGAAAAGATGTGGAAAGTGATGGCAGAATGTCATCAAACACAGAAGAGAACCTTAGATGAGGCTAAGATTCTTCTAGCTGGCACACCTTCTAAATTACATTCCAGAAGACAACAACAGTCTTCCATGTCAATGACCGATCCAAATAGGCTGGCACGATCAGCCTCAAATCTCGAAACCGAGTTACGAAACTGGCGAAACACCTTTGAGTCATGGATCACTTCTCAAAGATCCTATATTCAAGCACTAACAGGATGGCTTCTCCGGTGCGTGAGATCCGAACCTGACGACGTAACAAAGTCACCATGCTCTCCTCATAGGTCAAGCAGCACTCACCCGTTATTCGGACTCATTGTTCAGTGGTCGAGGCGTTTAGATGCCGTACGCGAAAAGGCAGTGCTTGATGGAATGGACTTTTTTGCAGCCGGGATGGGATCACTCTATGCACATCAATTGAGACAAGATTCGAGGACGAATTCATATGCACCGAAGCAAAGTGGTGAGAATATGGAATTGGTGGAAGTTGGTCATGTGGAAGAAGAAGCAATGGCTCCTGAAAAACTTGCTGAAGTTGCTATTAAAGTGCTTTGTGCTGGAATGTCTGTTGCTATAAGCTCATTAGCTGATTTTGCTTTTGATTCTGCTGAGGCATATAGTGAAGTTGTCAAGCAATGGGAGAATGTGAAGGATCGGAAGGACAATTCTAGTGAGACTAGAACATAG 2517 0.4148 MGCSQSKLDDEESVQLCKDRKRFIKQAVEQRTRFATSHIAYIESMKRVSAALRDYIEGDEPREFSLDSVITPPFTPVKKRTNRSIGNGNSNGNGNDFIPISAKSFTPSTIEFGVGPNSNLRMNYFRPSGNPVISVEERAPAPETVRIETYSPMQQHYGMDGYFTMQSPPMNPSIFPYSPPNVRSNIPPPSPQNPQWDFFWNPFSSFDYYGYPSRSSLDQTGIDDEYRELRQVREEEGIPDLEEDETEQEDYVRKRNVVEERTRNVVEGRTRNVVEGRTRNVVEERTRNVVEGRTRNVVEERTRNVVEERTRNDVKFSKEEVVVEDIDDDDEEEEDDEECEEGGTDDETETETEIEHDAKDSQQVHGNASFEVSKNQAAGHIESSHREMAIGKQEAKEEMAGFTVYVNRRPTSMAEVINDLEAQFKTVCNAANDVSVLLESKKAQYLLTSHEHSASKLLNPVAMFRSASSRSSSSRFLANSSSTRMESYEGSKDISDEHCRLSGSHQSTLDKLNAWEKKLYEEVKAGERIRIAYEKKCKQLSNYEVKGEDPSADKTRAAIRDLDTQITVSIHSVEAISRRIETLRDKELHPQLLELVQGLEKMWKVMAECHQTQKRTLDEAKILLAGTPSKLHSRRQQQSSMSMTDPNRLARSASNLETELRNWRNTFESWITSQRSYIQALTGWLLRCVRSEPDDVTKSPCSPHRSSSTHPLFGLIVQWSRRLDAVREKAVLDGMDFFAAGMGSLYAHQLRQDSRTNSYAPKQSGENMELVEVGHVEEEAMAPEKLAEVAIKVLCAGMSVAISSLADFAFDSAEAYSEVVKQWENVKDRKDNSSETRT* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0679 838 Pfam Protein of unknown function (DUF632) 413 742 IPR006867 -
Tpr5g0679 838 MobiDBLite consensus disorder prediction 630 649 - -
Tpr5g0679 838 PANTHER DUF630 FAMILY PROTEIN 1 838 - -
Tpr5g0679 838 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Tpr5g0679 838 MobiDBLite consensus disorder prediction 323 353 - -
Tpr5g0679 838 MobiDBLite consensus disorder prediction 629 649 - -
Tpr5g0679 838 PANTHER UNCHARACTERIZED 1 838 - -
Tpr5g0679 838 MobiDBLite consensus disorder prediction 318 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0679 Tpr-Chr5 11101220 11106653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0679 499 781 Acyl Lipid Metabolism Gene Families AT2G27090 35.664 9.77e-46 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0679 - - mtr:MTR_2g036920 1150.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3364 2 37149309 37153579 Tpr5g0679 5 11101220 11106653 PCT