Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0673 ATGGCAGTTTCCATGAGAGATTTGGATCCAGTTTTCCAGGGAGCTGGACAAAAGGCTGGACTTGAAATATGGCGTATTGAGAATTTTAATCCAGTACCTGTTCCAAAGTCCTCATATGGAAAATTTTTCACTGGGGATTCCTATGTGATCTTAAAGACAACTGCATCAAAAAGTGGTGCTCTGCGTCATGACATCCATTACTGGATTGGTAAAGACACCAGTCAGGATGAAGCTGGTGTTGCAGCCATCAAGACAGTTGAGCTGGATGCAGCTCTTGGAGGACGTGCTGTTCAATATCGGGAAGTACAGGGCCATGAAACTGAAAAGTTCCTGTCGTATTTCAAACCTTGTATTATACCTCAAGAAGGTGGTGTTGCTTCTGGTTTTAAACATGCCGAGGCTGAAAAGCACAAGACACGGTTGTTTGTATGCAGAGGGAAACATGTTGTACACGTCAAAGAGGTTCCTTTTGCTCGATCTTCACTCAACCATGATGATATTTTTGTTCTTGACACTGAGTCAAAAATCTTCCAATTTAATGGTTCCAATTCATCTATTCAAGAAAGGGCTAAAGCTTTGGAAGTTGTACAGTATATTAAGGATACCTACCATGAGGGGAAATGCGAGATAGCTGCTATCGAGGATGGAAAGTTAATGGCTGATCCTGAAACTGGGGAATTCTGGGGTTTCTTTGGTGGATTCGCTCCACTTCCACGAAAAACAGCCAGTGATAATGATAAGCCTGCTGATTCTCGTTCTCCAAAACTGCTTCGTGTTGAAAAGGGACAGGCGGAACCTGTTGAGGATGATTCTTTAAAAAGGGAGTTTCTAGACACAAATAAATGTTACATTCTGGATTGTGGGTTGGAAATGTTTGTCTGGATGGGAAGAAACACCTCTCTTGATGAAAGAAAAAGTGCAAGTGGAGTTGCTGATGAGTTAGTCAGTGGCACTGATCAACCTAAACCCCAAATAATTCGAGTAATTGAAGGATTTGAAACTGTGCTGTTTAAGTCCAAGTTTGAGTCTTGGCCTGAGACCCCGGATGTAACTGTATCTGAAGATGGACGCGGGAAGGTAGCAGCACTTCTGAAACGTCAAGGAGTAAATGTCAAGGGTCTGTTGAAAGCTGATGCAGTGAAAGAAGAACCTCAACCTTACATTGACTGTACTGGACATTTGCAGGTTTGGCGCGTGAACGGTCAGGAAAAGATTCTTCTCCCAGCTTCTGATCAATCAAAATTTTATAGTGGAGATTGCTTCATCTTTCAATATTCATATCCTGGAGAAGATAAGGATGATTGTCTTATTGGAACGTGGATAGGAAAGAACAGTGTTGAGGAAGAAAGGGCTTCAGCTAATTCACTGGTTAGCAAAATGGTCGAGTCAATGAAGTTTCTGGCTTCCCAGGCTCGTATATACGAAGGCAATGAACCAATTCAATTTCATTCTATCCTACAAACCTTCATTGTTTTTAAGGGCGGACTTAGTGATGGGTACAAGACTTACATTGCGGAAAAGGAAATTCCAGATGATACATACACTGAGGACAGTTTAGGATTATTCCGAATCCAAGGCTCTGGACCAGACAATATGCAAGCTATACAAGTTGAACCGGTTGCTTCTTCGTTGAATTCCTCTTATTGCTATATACTTCATAATGGGCCTGCGGTCTTTACTTGGTCTGGAAGCAATACAAGTGCAGAAGACCAGGAACTTGTAGAGAGGATGCTGGATTTGATAAAGCCAAATTTACAATCAAAACCACAAAGGGAAGGTACTGAATCTGAACAATTTTGGGATTTGTTGGGAGGAAAGTCAGAATATCCCAGTCAAAAGATTAGTAGGGAGCCTGAAAGTGATCCACACCTATTTTGTTGCAACTTCTCAAAAGGAAACTTAAAGGTGACGGAGATATACAACTTCTCCCAGGATGATTTAATGACAGAAGACATTTTCATCTTGGATTGTTACTCAGAAATCTTTGTCTGGGTTGGCCAGGAGGTTGACCCCAAGAGTAGAATGCAGGCGCTAACAATTGGTGAGAAATTTATTGAGCATGATTTTCTGCTGGAAAAGTTATCTCGCGTGGCTCCAGTATATGTTATCATGGAAGGGAGTGAGCCACCGTTTTTCACTCGCTTTTTTAATTGGGAGTCGGCGAAGTCTGCAATGTTGGGGAACTCATTTCAAAGGAAGCTTAAAATCGTGCAAAATGGGGGTGCTGCACCATTGGATAAACCAAAACGGCGAACACCTACATATGGAGGAAGGTCTAGTAGTGTGCCTGATAAGTCCCAGCAGCGTTCCTCTCGTAGCATGTCTGTTAGTCCTGACCGTGTTCGTGTGAGGGGAAGGTCTCCAGCCTTTAATGCACTGGCTGCTACTTTTGAGAGCTCCAATGCTAGGAATCTTTCAACTCCACCTCCAGTAATTAGAAAGCTGTATCCAAAATCTACGACACCAGATTCTGCAATACTAGCGTCAAAATCTAAAGCCATAGCTGCACTTACTTCTACTTTTGAACAACCACCTTCTGCACGGGAAAGTTTGATACCTCGATCAGTTAAAGTGAGTCCAATCACCCCTAAATCAAACCCTGATAAAAATGACAAGGAGAATTCTGTGAGCGGCAGAGTGGACTCTCTTACCATAGATGAAGATGTGAAAGAAAGTGAAGCTGAAGATGAGGAAGGTCTCCTGATTTACCCATATGAACGCCTTAAAATAACTTCTACAGATCCTGTGCCGGACATTGATGTAACTAAAAGAGAGACTTATCTATCATCTGCGGAGTTCAAAGGGAAATTTGGGATGTCCAAGGATGCTTTTTACAAGTTGCCCAAATGGAAACAAAACAAACTCAAAATGGCTATTCAGTTATTCTGA 2889 0.4213 MAVSMRDLDPVFQGAGQKAGLEIWRIENFNPVPVPKSSYGKFFTGDSYVILKTTASKSGALRHDIHYWIGKDTSQDEAGVAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGVASGFKHAEAEKHKTRLFVCRGKHVVHVKEVPFARSSLNHDDIFVLDTESKIFQFNGSNSSIQERAKALEVVQYIKDTYHEGKCEIAAIEDGKLMADPETGEFWGFFGGFAPLPRKTASDNDKPADSRSPKLLRVEKGQAEPVEDDSLKREFLDTNKCYILDCGLEMFVWMGRNTSLDERKSASGVADELVSGTDQPKPQIIRVIEGFETVLFKSKFESWPETPDVTVSEDGRGKVAALLKRQGVNVKGLLKADAVKEEPQPYIDCTGHLQVWRVNGQEKILLPASDQSKFYSGDCFIFQYSYPGEDKDDCLIGTWIGKNSVEEERASANSLVSKMVESMKFLASQARIYEGNEPIQFHSILQTFIVFKGGLSDGYKTYIAEKEIPDDTYTEDSLGLFRIQGSGPDNMQAIQVEPVASSLNSSYCYILHNGPAVFTWSGSNTSAEDQELVERMLDLIKPNLQSKPQREGTESEQFWDLLGGKSEYPSQKISREPESDPHLFCCNFSKGNLKVTEIYNFSQDDLMTEDIFILDCYSEIFVWVGQEVDPKSRMQALTIGEKFIEHDFLLEKLSRVAPVYVIMEGSEPPFFTRFFNWESAKSAMLGNSFQRKLKIVQNGGAAPLDKPKRRTPTYGGRSSSVPDKSQQRSSRSMSVSPDRVRVRGRSPAFNALAATFESSNARNLSTPPPVIRKLYPKSTTPDSAILASKSKAIAALTSTFEQPPSARESLIPRSVKVSPITPKSNPDKNDKENSVSGRVDSLTIDEDVKESEAEDEEGLLIYPYERLKITSTDPVPDIDVTKRETYLSSAEFKGKFGMSKDAFYKLPKWKQNKLKMAIQLF* 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0673 962 Pfam Gelsolin repeat 150 216 IPR007123 -
Tpr5g0673 962 Pfam Gelsolin repeat 638 712 IPR007123 -
Tpr5g0673 962 Pfam Gelsolin repeat 28 111 IPR007123 -
Tpr5g0673 962 Pfam Gelsolin repeat 268 334 IPR007123 -
Tpr5g0673 962 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Tpr5g0673 962 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Tpr5g0673 962 PRINTS Gelsolin family signature 436 454 IPR007122 GO:0051015
Tpr5g0673 962 PRINTS Gelsolin family signature 469 489 IPR007122 GO:0051015
Tpr5g0673 962 PRINTS Gelsolin family signature 532 552 IPR007122 GO:0051015
Tpr5g0673 962 PRINTS Gelsolin family signature 592 611 IPR007122 GO:0051015
Tpr5g0673 962 PRINTS Gelsolin family signature 644 666 IPR007122 GO:0051015
Tpr5g0673 962 PRINTS Gelsolin family signature 673 692 IPR007122 GO:0051015
Tpr5g0673 962 PANTHER VILLIN 1 962 IPR007122 GO:0051015
Tpr5g0673 962 MobiDBLite consensus disorder prediction 754 777 - -
Tpr5g0673 962 ProSiteProfiles Headpiece (HP) domain profile. 897 962 IPR003128 GO:0003779|GO:0007010
Tpr5g0673 962 MobiDBLite consensus disorder prediction 741 783 - -
Tpr5g0673 962 Gene3D Villin headpiece domain 900 962 IPR036886 GO:0003779|GO:0007010
Tpr5g0673 962 MobiDBLite consensus disorder prediction 241 266 - -
Tpr5g0673 962 PANTHER VILLIN-3-LIKE 1 962 - -
Tpr5g0673 962 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 260 427 IPR036180 -
Tpr5g0673 962 CDD gelsolin_S2_like 138 223 - -
Tpr5g0673 962 Pfam Villin headpiece domain 927 962 IPR003128 GO:0003779|GO:0007010
Tpr5g0673 962 SUPERFAMILY Actin depolymerizing proteins 595 717 - -
Tpr5g0673 962 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Tpr5g0673 962 Gene3D Severin 7 132 IPR029006 -
Tpr5g0673 962 SUPERFAMILY Actin depolymerizing proteins 382 528 - -
Tpr5g0673 962 CDD gelsolin_S6_like 621 718 - -
Tpr5g0673 962 MobiDBLite consensus disorder prediction 243 266 - -
Tpr5g0673 962 SUPERFAMILY VHP, Villin headpiece domain 889 962 IPR036886 GO:0003779|GO:0007010
Tpr5g0673 962 SUPERFAMILY Actin depolymerizing proteins 129 240 - -
Tpr5g0673 962 SMART VHP_1 927 962 IPR003128 GO:0003779|GO:0007010
Tpr5g0673 962 Gene3D Severin 247 354 IPR029006 -
Tpr5g0673 962 SMART VILL_6 137 234 IPR007122 GO:0051015
Tpr5g0673 962 SMART VILL_6 252 344 IPR007122 GO:0051015
Tpr5g0673 962 SMART VILL_6 519 606 IPR007122 GO:0051015
Tpr5g0673 962 SMART VILL_6 622 719 IPR007122 GO:0051015
Tpr5g0673 962 SMART VILL_6 19 117 IPR007122 GO:0051015
Tpr5g0673 962 SMART VILL_6 392 489 IPR007122 GO:0051015
Tpr5g0673 962 CDD gelsolin_S3_like 254 343 - -
Tpr5g0673 962 Gene3D Severin 613 733 IPR029006 -
Tpr5g0673 962 MobiDBLite consensus disorder prediction 844 893 - -
Tpr5g0673 962 Gene3D Severin 388 501 IPR029006 -
Tpr5g0673 962 CDD gelsolin_S4_like 386 485 - -
Tpr5g0673 962 CDD gelsolin_S1_like 12 124 - -
Tpr5g0673 962 CDD gelsolin_S5_like 521 608 - -
Tpr5g0673 962 Gene3D Severin 518 612 IPR029006 -
Tpr5g0673 962 Gene3D Severin 133 246 IPR029006 -
Tpr5g0673 962 SUPERFAMILY Actin depolymerizing proteins 511 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0673 Tpr-Chr5 10969668 10983044 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0673 - - gmx:100808499 1736.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0673 5 10969668 10983044 Tpr2g3357 2 37115832 37124612 PCT