Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0666 ATGTTGGGTGGTTCACTCTCAACTCCAACAACTCAATGTCTTAAGACAAGAACAACAACAATTGCAATGCTTTATCCATCTCATAGATTATTGTCCACACATTTTTGTCTCTTTAAGAATCTTATATCAGGTACTAGAAGATTTTCTTCAAAAGAGAGTTGTTTTCTCAGAGGGCATCAAATTAATATTAAGCAATTTTTTGGGCTTATCTCTCGTAGAGCTCCAAGAAACAAAGCAGGATTTGTTGTCTCTCCAAGATGTGTCCTGCCATTGACAGAAGAGAATGTGGAGAGGGTTTTGGATGAGGTAAGGCCTGGTTTGATGGCTGATGGAGGGAATGTGGCATTGCATGAGATAGATGGTCTTGTTGTTATCCTCAAACTACAAGGAGCATGTGGATCATGTCCTAGTTCAACCATGACATTAAAAATGGGGATTGAAACTCGCCTTCGCGATAAGATTCCAGAGATCTTGGAAGTAGAGCAGATACTAGATACTGAGACCGGTCTTGAGTTAAATGAAGAAAATGTTGAAAGTATTCTTTCAGAAATTAGACCATATCTTATTGGCACAGGAGGAGGAACATTAGAGCTTGTTGAGATTAACGATTACATTGTTCAAGTTCGGTTAAGTGGACCAGCAGCAGGAGTTATGACGGTTCGTGTTGCCTTAACGCAGAAACTGAGAGACAAGATACCTTCTATTGCTGCAGTGCAGTTAATAGAATGA 729 0.3964 MLGGSLSTPTTQCLKTRTTTIAMLYPSHRLLSTHFCLFKNLISGTRRFSSKESCFLRGHQINIKQFFGLISRRAPRNKAGFVVSPRCVLPLTEENVERVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEVEQILDTETGLELNEENVESILSEIRPYLIGTGGGTLELVEINDYIVQVRLSGPAAGVMTVRVALTQKLRDKIPSIAAVQLIE* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0666 242 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 171 241 IPR034904 -
Tpr5g0666 242 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 93 167 IPR034904 -
Tpr5g0666 242 PANTHER NIFU-LIKE PROTEIN 3, CHLOROPLASTIC 8 242 - -
Tpr5g0666 242 Pfam NifU-like domain 96 161 IPR001075 GO:0005506|GO:0016226|GO:0051536
Tpr5g0666 242 Pfam NifU-like domain 177 239 IPR001075 GO:0005506|GO:0016226|GO:0051536
Tpr5g0666 242 Gene3D - 88 170 IPR034904 -
Tpr5g0666 242 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 8 242 - -
Tpr5g0666 242 Gene3D - 171 242 IPR034904 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0666 Tpr-Chr5 10793206 10795336 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0666 - - gmx:100806364 384.415