Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0649 ATGAGTTGCAATAAGCTCATTAGTTTTACTTTTCAGCAACTAAGTAAAAGACGATTTCATGGCACTGCCCAAACAAGTTCAAGATATTGGAGAGGTCTTGTTGAGAAAGAGTTAAATAGTGGAAACATTGAAGAAAAAAATGAGAGTGTATGCATATACAAGGTTCCACCAAACATGCTCAATGTAGAACCAAAAGCCTACATACCCAATAACATCTCAATAGGTCCTTATCATTATGGATCACAACACTTGCAAGAGATGGAAATTCTCAAAAACAAATTCTTTCACCGTCTTTTCGATCCTAATGGTGCTAATGGAACCAAATTAGAAGAGGCATGTAAGTTTCTTGAGAAAGAAGAAATCAATGCTAGAAGTTGTTACAAGGGTGACATCAAATTAAGCAGCGATGAGTTTCTAAAGATGATGTTGGTTGATGGTTCTTTCATCATTCAACTCTTGAGGGATTTATCAGATAACAATTTCAAACATGTTCCATCTCTTAGTAGATGGATGTTACCAACCATTCGTCGCGAGTTGATAATGCTGGAAAACCAACTTCCTATGTTTGTTTTAACAAAGTTGTTCGAGTTAACCGATAAGACGAATAGTTCTCAACCACAAATGAGTTTCTACAATCTCGCCTTCAAATTCTTCTACCAATTGCTTCAATCCGAGTCACGAAAAACCCCTGAATGTCAAACTGCTTACAAGTTCAAAATTGAACATGTTCTTGATCTTCTCAGATACAACATAAGACCGAAACTCATCGGTGAAGAACCGAGAGGGTCTCAGAGTCAAATGATTCATTCAATAACAGAACTGAAAGAAGGGGGTGTGAAAATTATAGCTTGTGAGGAGAGAGAATTGTTGGATATAAGCTTTGGAAAAAAATGGGGAATTATGATAAAGGAACTAAGTATGCCACCGGTTTACATCGGTGATCATAGAGGAACCGTGTTTCGTAACATGGTTGCATTTGAGAAATGTCACAAGAGATGTAATCCAGACATGACAACTTACATGTTTTTCTTAAACAGGCTCATAAATTCAGCTGAAGATGTTTCTGTTCTTCATTATAAAGGGATTATTCATCATTCTTTAGGGAATGATGAACATGTGGCAGACTTAATCAACAACATAGCTAAGGATATTGTTCCTGATATGAATGAGTCCTATTTGTACAAAGTCGTAAATGAGGCGAATGAGTATCTGGGTTGTTGGCGCGCGAGATTCAGGGCTTCACTAGTTCATAACTATTTAACAAGTTGGGCTGTTGGACTTTCAACAGTAGGTGCTCTTTTGGTTCTTTACTTTACATTCATACAAGCAATTTGTGGGTTCGCGGATGCATACGCAAAATTGGAGAAGGCTAAGTTCAGTACAGTGATAAGAGGTTTGCTTATTGTTCCATTTCAGTACCCTCCTCACTCTGCAGTATTCCATGATGACAGTAAAGAACCTGATCATGGTTCTAAGTAA 1479 0.3739 MSCNKLISFTFQQLSKRRFHGTAQTSSRYWRGLVEKELNSGNIEEKNESVCIYKVPPNMLNVEPKAYIPNNISIGPYHYGSQHLQEMEILKNKFFHRLFDPNGANGTKLEEACKFLEKEEINARSCYKGDIKLSSDEFLKMMLVDGSFIIQLLRDLSDNNFKHVPSLSRWMLPTIRRELIMLENQLPMFVLTKLFELTDKTNSSQPQMSFYNLAFKFFYQLLQSESRKTPECQTAYKFKIEHVLDLLRYNIRPKLIGEEPRGSQSQMIHSITELKEGGVKIIACEERELLDISFGKKWGIMIKELSMPPVYIGDHRGTVFRNMVAFEKCHKRCNPDMTTYMFFLNRLINSAEDVSVLHYKGIIHHSLGNDEHVADLINNIAKDIVPDMNESYLYKVVNEANEYLGCWRARFRASLVHNYLTSWAVGLSTVGALLVLYFTFIQAICGFADAYAKLEKAKFSTVIRGLLIVPFQYPPHSAVFHDDSKEPDHGSK* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0649 492 Pfam Plant protein of unknown function 52 437 IPR004158 -
Tpr5g0649 492 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 43 445 IPR004158 -
Tpr5g0649 492 PANTHER OS09G0300150 PROTEIN 43 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0649 Tpr-Chr5 10303118 10305036 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0649 - - gmx:102663948 573.933