Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0646 ATGTCTATCTTTCGTGAATACATTGGTGTGAAGCCACCCTCAAAAAGTTTAGTTGATTATCCAACTGAAATCATCAACTCCAATATCAAAGAATTTCACTTCATTTTGGGATTTGCCAATGAGCAGTATGTCAACGACAGCAACTACAATAAGAAAGGAACCGGAAGTTTCAAGGAAAGTTGGAATGTTGATTTCTTCGGTCCAGACAAAGTGAGAATATTGAAGGAAACATATGCAAATGTTAAGGTGGTAATAAGCATTGGAGGTCGTGACTCTAAAACTCCATTCGATCCTCTTACGGGCCTTGAAAAATGGAGTAAGGAGGCTGTAAACTCACTCAAAAGGATCATCGGAAAATACAAGAGTTCAAGCGGCGACAACACAATTGATGGCATTGACATTAATTATCAGCACATCCACGGTTCTGATTCTGACCCAGATCGTTTTGCCAACTACCTCGGAAGGGTCATAACAGAGCTCAAAAATGATACTGATCTACGTATCAATGTGGTGTCCATTGCCCCATCACATAACAATGATACCCACTACCGCAATTTGTATTCGGAAAATAAAGATAACATTAATTGGGTTGACTACCAATTCTACAACAACCCTCACGTTATATCCACATATGAGGAATTTCTAAACCTCTACAATAAGGCAGCAGATGATTATTGTCGTGAAAAAGTCCTTCCAGGACTTAGCACTGACCCTGCAGATGATAAGATGCCGTGGGAGATCTTCATTGGTGGCTGCATATTGCTCAAGCAGCAATCAAAACTCCCTGGTATTTTTATTTGGAATGCTAACGACTCTGCAATTCCTGTCCCTGGTGAGAACAAAGGTTTCCTCCTGGAGATCTTCTTGCAACGCCTCCTTGTACAAACTAATTAG 894 0.4049 MSIFREYIGVKPPSKSLVDYPTEIINSNIKEFHFILGFANEQYVNDSNYNKKGTGSFKESWNVDFFGPDKVRILKETYANVKVVISIGGRDSKTPFDPLTGLEKWSKEAVNSLKRIIGKYKSSSGDNTIDGIDINYQHIHGSDSDPDRFANYLGRVITELKNDTDLRINVVSIAPSHNNDTHYRNLYSENKDNINWVDYQFYNNPHVISTYEEFLNLYNKAADDYCREKVLPGLSTDPADDKMPWEIFIGGCILLKQQSKLPGIFIWNANDSAIPVPGENKGFLLEIFLQRLLVQTN* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0646 297 Gene3D Glycosidases 1 296 - -
Tpr5g0646 297 PANTHER CHITINASE 2-LIKE 2 295 - -
Tpr5g0646 297 PRINTS 2-S globulin family signature 1 14 IPR000677 -
Tpr5g0646 297 PRINTS 2-S globulin family signature 24 43 IPR000677 -
Tpr5g0646 297 PRINTS 2-S globulin family signature 114 136 IPR000677 -
Tpr5g0646 297 PRINTS 2-S globulin family signature 192 215 IPR000677 -
Tpr5g0646 297 PRINTS 2-S globulin family signature 250 269 IPR000677 -
Tpr5g0646 297 SUPERFAMILY (Trans)glycosidases 30 274 IPR017853 -
Tpr5g0646 297 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 2 297 IPR001223 GO:0005975
Tpr5g0646 297 PANTHER CHITINASE 2 2 295 - -
Tpr5g0646 297 Pfam Glycosyl hydrolases family 18 34 204 IPR001223 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0646 Tpr-Chr5 10253134 10254382 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0646 - - mtr:MTR_0062s0020 345.895