Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0590 ATGAATGATCAAAACAACTCCGAAGTTACTGAAAAGGGTATAAATGATAAACCTGTTCGTGTTTATGCTGATGGAATTTACGATCTATTTCACTTTGGTCATGCTCGTTCTCTTGAACAAGCCAAAAAATCGTTTCCAAACACTTATCTCCTTGTTGGATGTTGCAATGATGAAACCACTCACAAGTATAAGGGTAAAACTGTTATGACTGAGGCTGAACGCTATGAGTCTCTTCGACACTGCAAGTGGGTTGACGAAGTTATTCCAGATGTGCCATGGGTAATCAATCAGGAGTTCATTGACAAGCATAACATCGACTATGTAGCACATGATGCACTTCCTTATGCTGATACAAGTGGAGCTGGAAAGGATGTCTATGAATTTGTTAAGGCTATTGGAAAATTTAAGGAAACAAAACGGACCGAAGGAATTTCTACATCTGATATCATAATGAGAATCATCAAAGATTATAACCAGTATGTAATGCGTAATTTGGATCGTGGTTATTCAAGAAAGGAGCTAGGTGTTAGCTATGTCAAGGAGAAAAGATTGAGAATGAACATGGGACTTAAGAAATTGCAGGAGAGAGTGAAGAAACAACAAGAGACCGTGGGAAAGAAGATAGGAACAGTGAAAAAAATTGCTGGCATGAACCGAACTGAATGGGTCGAAAATGCTGATCGATTAGTTGCTGGATTTCTTGAGATGTTTGAAGATGGATGCCACAAAATGGGAACGGCAATCAGAGACAGAATTCAAGAACAACTGAAGGCACAGCAGCTAAGATCTCTTCTTTATGATGAGTGGGATGATGATGATGGTGACGACGAATTCTATGATGATGAATCTGTAGAATTCTACAGCGACTAA 870 0.3897 MNDQNNSEVTEKGINDKPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKYKGKTVMTEAERYESLRHCKWVDEVIPDVPWVINQEFIDKHNIDYVAHDALPYADTSGAGKDVYEFVKAIGKFKETKRTEGISTSDIIMRIIKDYNQYVMRNLDRGYSRKELGVSYVKEKRLRMNMGLKKLQERVKKQQETVGKKIGTVKKIAGMNRTEWVENADRLVAGFLEMFEDGCHKMGTAIRDRIQEQLKAQQLRSLLYDEWDDDDGDDEFYDDESVEFYSD* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0590 289 Gene3D HUPs 2 239 IPR014729 -
Tpr5g0590 289 TIGRFAM cyt_tran_rel: cytidyltransferase-like domain 20 87 IPR004821 GO:0003824|GO:0009058
Tpr5g0590 289 CDD CCT 17 168 IPR041723 -
Tpr5g0590 289 SUPERFAMILY Nucleotidylyl transferase 20 152 - -
Tpr5g0590 289 Pfam Cytidylyltransferase-like 22 151 IPR004821 GO:0003824|GO:0009058
Tpr5g0590 289 PANTHER CYTIDYLYLTRANSFERASE 3 285 IPR045049 GO:0004105|GO:0006657
Tpr5g0590 289 PANTHER CHOLINE-PHOSPHATE CYTIDYLYLTRANSFERASE 2-LIKE ISOFORM X1 3 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0590 Tpr-Chr5 9124848 9128640 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0590 45 287 Acyl Lipid Metabolism Gene Families AT2G32260 74.902 5.07e-135 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0590 K00968 - gmx:100791886 484.952