Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0586 ATGGCCACAAACACCATGGCTGGTTTGATCACCGGCACTAATTCAAATTTCTCACATGACTCTGATGAGCATAAGCAGCCTCCTAGCAGTAAATCTTCATCGAAAATATGTCGAGTTTGTGGTGATGAGATCGGACATAAGGAAAATGGAGAGCTTTTTGTGGCTTGTCTTGTGTGTGGATTTCCTGTTTGTAAACCTTGTTATGAGTATGAGAGGAGTGAAGGCAATCAATGTTGTCCTCAATGCAACACTCGCTATAAGCGCCATAAAGGCTGTCCAAGAGTGGTTGGAGATGAAGATGAGAACCTTGATGGAGATGATTTTGAAGACGAGTTTCCAATTAAGAATCATCATGAGGATCTAGACCAGCACCGCGATGTTAATCATGCGGAAAATGGAGACTACAATCAACAGAAATTGTATTCTAATGGACAAGCTTTTTCTTCGGCTGGAAGTGTTACTGGCAAGGATTTGGAAGGGGATAAGGAATTTCTGAGCAATGCAGAATGGCAAGAAAGAGTTGAGAAATGGAAAGTAAGGCAAGAAAAGAGAGGTTTACTAAACAAAGAGGATGGTAAAGAAGATCCAGGTGAAGAAGATGAATACCTTATGGCTGAAGCAAGACAACCATTATGGCGCAAAGTTCCAATACCGTCAAGCTTAATAAATCCATACCGCATAGTAATCGTGATGAGACTTGTAATCCTATGTTTCTTCTTCCGTTTCCGTATCTTAACACCAGCATATGATGCATACCCTTTATGGCTCATATCAGTTATATGTGAAATATGGTTTGCATTATCATGGATACTTGATCAGTTTCCAAAATGGTTACCAATCACACGTGAAACTTACTTAGACCGTTTATCTATAAGATTCGAACGTGAAGGTGAACCAAACCAACTTTCACCTGTCGATGTTTTTGTTAGTTCTGTTGATCCTTTGAAAGAACCACCTATTATAACAGCAAACACTGTTCTGTCAATACTTTCTGTCGATTATCCTGTCGACAAAGTCACATGCTATGTATCAGATGATGGTGCTTCTATGCTTTTGTTTGATTGTTTGGCTGAAACTTCTGAGTTTGCTAGAAGGTGGGTTCCTTTTTGTAAAAAGTATAGTATTGAACCGAGGGCACCTGAGTATTATTTCAATGAGAAGATTGATTACTTGAAGGATAAAGTTGAGCCTACTTTTGTCAAAGAAAGAAGGTCTATGAAGAGAGAATATGAAGAATTTAAAGTGAAAATTAATGCTTTGGTGGCAAAAGCTCTGAAGAAACCAGAAGAAGGTTGGGTTATGCAGGATGGAACTCCATGGCCTGGTAACAACACTCGCGATCATCCAGGAATGATTCAGGTATACTTAGGAAGTGCTGGTGCACTAGACGTGGAAGGCAAGGAACTGCCAAAACTTGTGTATATTTCGCGTGAAAAGCGTCCCGGTTATCCACATCACAAGAAAGCTGGTGCCATGAATGCTTTGGTTCGAGTTTCTGCCGTGCTCACAAATGCACCATTTATGTTGAATCTTGATTGTGATCACTACATCAACAATAGTAAGGCTATTAGGGAGGCCATGTGTTTCCTAATGGATCCTCAGCTAGGGAAGAAACTCTGCTATGTCCAATTTCCTCAAAGATTTGATGGTATTGATCGTCACGATCGATACGCTAATCGCAACACTGTTTTCTTTGATATCAATATGAAAGGGCTTGATGGAATTCAAGGTCCAGTATATGTCGGTACCGGTACTGTGTTCAACAGACAAGCATTGTATGGTTATGATCCACCAGTTTCTGAGAAAAGGCCAAAGATGACATGTGATTGTTGGCCTAAATGGTGTTGCTTTTGTTGTGGTTCAAGGAAGACGAAATCGAAAAAGAAGTCAGGAACATCAGGTCTCTTTAGTAGATTGTACAAGAAGAAGAAAATGGGAGGGAAAGATTATGTTAGAAAAGGTTCTGGTTCCATGTTTGATCTTGAAGAGATTGAAGAAGGACTTGAAGGGTATGATGAGCTAGAGAAATCGTCACTCATGTCACAGAAAAATTTCGAGAAGAGATTCGGACAGTCGCCGGTTTTCATTGCTTCAACTTTGATGGAAAATGGAGGACTTCCTGAAGGCACAAATACACAATCATTGGTTAAGGAAGCCATTCATAACATAAGCTGTGGCTATGAAGAGAAGACTGAATGGGGAAAAGAGATTGGATGGATTTATGGCTCAGTCACAGAAGATATATTGACTGGATTTAAGATGCATTGTAGAGGATGGAAATCAGTATATTGCATGCCAAAGAGACCAGCTTTCAAGGGATCTGCACCAATCAATCTATCAGATAGGTTGCACCAAGTTCTTAGATGGGCTCTTGGTTCTGTCGAGATTTTCCTTAGTCGCCATTGTCCATTGTGGTATGGTTATGGAGGAAAATTAAAGTATCTAGAGAGATTGGCTTATACTAATACCATTGTTTATCCATTCACTTCAATCCCTTTGCTTGCATACTGCACAATTCCAGCCGTGTGTCTTCTTACCGGAAAGTTCATCATTCCAACTCTGACCAACCTTGCTAGTGTTTGGTTTATGGCACTATTTATCTCCATCATTTTAACCGGCGTACTCGAGCTTCGATGGAGTGGAGTTGCCATCGAAGATTGGTGGAGAAACGAGCAATTTTGGGTGATTGGAGGTGTCTCGGCGCATCTTTTTGCAGTGTTTCAAGGTCTCCTAAAAGTTCTTGCAGGAGTAGACACAAACTTCACTGTCACAGCAAAAGCAGCCGATGATGCTGAATTCGGAGAATTATATCTTTTCAAATGGACAACACTTCTCATTCCACCAACAACTCTTATAATCTTGAACATTGTTGGCGTTGTTGCCGGTGTCTCTGATGCAATAAATAGTGGTTCTGGTTCATGGGGACCTTTATTTGGGAAACTGTTCTTTGCATTTTGGGTCATTGTTCATTTATATCCTTTCCTTAAAGGTCTAATGGGAAAACAAAATAGGACTCCTACTATTGTGGTACTTTGGTCAATCCTTTTGGCATCAATTTTCTCATTGATTTGGGTGAGGATTGATCCTTTCTTACCTAAACAAACTGGTCCTATACTCAAACAATGTGGAGTTGAATGCTGA 3141 0.4027 MATNTMAGLITGTNSNFSHDSDEHKQPPSSKSSSKICRVCGDEIGHKENGELFVACLVCGFPVCKPCYEYERSEGNQCCPQCNTRYKRHKGCPRVVGDEDENLDGDDFEDEFPIKNHHEDLDQHRDVNHAENGDYNQQKLYSNGQAFSSAGSVTGKDLEGDKEFLSNAEWQERVEKWKVRQEKRGLLNKEDGKEDPGEEDEYLMAEARQPLWRKVPIPSSLINPYRIVIVMRLVILCFFFRFRILTPAYDAYPLWLISVICEIWFALSWILDQFPKWLPITRETYLDRLSIRFEREGEPNQLSPVDVFVSSVDPLKEPPIITANTVLSILSVDYPVDKVTCYVSDDGASMLLFDCLAETSEFARRWVPFCKKYSIEPRAPEYYFNEKIDYLKDKVEPTFVKERRSMKREYEEFKVKINALVAKALKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSAGALDVEGKELPKLVYISREKRPGYPHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAIREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGIQGPVYVGTGTVFNRQALYGYDPPVSEKRPKMTCDCWPKWCCFCCGSRKTKSKKKSGTSGLFSRLYKKKKMGGKDYVRKGSGSMFDLEEIEEGLEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLMENGGLPEGTNTQSLVKEAIHNISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGKLKYLERLAYTNTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLTNLASVWFMALFISIILTGVLELRWSGVAIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTAKAADDAEFGELYLFKWTTLLIPPTTLIILNIVGVVAGVSDAINSGSGSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSILLASIFSLIWVRIDPFLPKQTGPILKQCGVEC* 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0586 1046 MobiDBLite consensus disorder prediction 1 30 - -
Tpr5g0586 1046 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 23 122 - -
Tpr5g0586 1046 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 164 1046 - -
Tpr5g0586 1046 Coils Coil 403 423 - -
Tpr5g0586 1046 CDD mRING-HC-C4C4_CesA_plant 36 85 - -
Tpr5g0586 1046 Pfam Cellulose synthase 305 1039 IPR005150 GO:0016020|GO:0016760|GO:0030244
Tpr5g0586 1046 SUPERFAMILY RING/U-box 22 104 - -
Tpr5g0586 1046 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 19 110 IPR013083 -
Tpr5g0586 1046 MobiDBLite consensus disorder prediction 1 17 - -
Tpr5g0586 1046 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 3 [UDP-FORMING]-RELATED 164 1046 - -
Tpr5g0586 1046 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 3 [UDP-FORMING]-RELATED 23 122 - -
Tpr5g0586 1046 SUPERFAMILY Nucleotide-diphospho-sugar transferases 319 850 IPR029044 -
Tpr5g0586 1046 Pfam Zinc-binding RING-finger 29 102 IPR027934 -
Tpr5g0586 1046 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 412 597 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0586 Tpr-Chr5 9076969 9083086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0586 23 1046 Glycosyltransferase AT5G05170 64.690 0.0 1422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0586 K10999 - gmx:100781996 1932.53