Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0583 ATGATTTCCACTTTCACTTTGTTTCATTCTTTCATCTTTTTCTTGTATCTCCTCATCTCAACTCCTTCACGTGCTTCTTTGTTTTCTGGAATTGAAACTGGAGATTTAGAAAAAAAGGGTGATTTGTTTCCACAGATTCTTAGAGATGAAGCAGTGGCAAGACTTCATGAGCTTGGAAAGGTCAGTGATGCTAGTGAATATCTTGAGAGGACATTTTTGAGTCCTGCAACCACGAGGGCAATTGATCTTATCCGAAAATGGATGGAAGATGCTGGTTTGAGAACTTGGGTGGATGAAATGGGAAATGTACATGGTAGAGTTGAGGGTGCAAATGCAAATACAGAAGCGTTATTGATTGGATCTCACATGGACACTGTTATTGATGCTGGTAAATTTGACGGAGCACTAGGAATAGTGTCTGCAATATCTGCTTTAAAGGTTATGCATGTCAACGGCAACCTGCAAAATCTAAGGCGTCCTGTTGAGGTGATTGCATTTTGTGATGAAGAGGGTGTGAGATTTCAAACTACTTTCTTAGGTAGTGGTGCTATAGCTGGTATTTTATCGGCCACAACATTGGAGATACCTGATAAGAAGAATGTAACGATAAAAGATGTTCTTAAAGAGAACTCAATAGAAGCTACGGAGGAAAGCCTTTTAAAGCTCAAGTATGATCCAAAATCTGTATGGGGTTATGTTGAGCTTCACATTGAGCAGGGTCCGGTCCTAGAACAAGTTGGTTTCCCACTTGGTGTGGTTAAAGGCATAGCTGGCCAGACGCGATTGAAGGTTACGGTTAAAGGCTCGCAAGGTCATGCGGGAACAGTTCCAATGTCCATGCGCCAGGATCCTATGGTGGCTGCTGCTGAACAAATTGTACTTATGGAAAACCTATGCAAACATCCTGAAGAATACCTTTCTTATGGCGGTCATTGCAGCGATTCATCGACAAAATCGCTTTCAAGTTCACTTGTTTGTACTGTTGGTGAAATATCAACATGGCCAAGTGCTAGTAATGTCATTCCAGGGCAGGTTACATATACCGTTGATATACGAGCAATTGATGATCTTGGACGTGAGGCCGTTATATATGATTTATCCAATCGAATTTATCAGATATGTGACAAGCGTTCAGTTTCATGCCTTATTGAACACAAGCATGATGCAGGTGCTGTGATTTGTGATTCTGAACTAAGTTCACAGCTTAAGTCTGCAGCTTATTCTGCACTCAAGAGAATGGAGGATGACATTCAAGATGAAGTACCGATATTAATGAGTGGAGCAGGACATGATGCCATGGCAATGTCTCGCTTAACAAAGGTGGCAATGTTATTTGTACGTTGTCGCGGAGGCATAAGTCACTCTCCACAAGAGGATGTGCTAGATAACGATATATGGGCAGCCGGTTTAGCAACCTTATCATTTCTGGAAAATCTATAA 1440 0.4146 MISTFTLFHSFIFFLYLLISTPSRASLFSGIETGDLEKKGDLFPQILRDEAVARLHELGKVSDASEYLERTFLSPATTRAIDLIRKWMEDAGLRTWVDEMGNVHGRVEGANANTEALLIGSHMDTVIDAGKFDGALGIVSAISALKVMHVNGNLQNLRRPVEVIAFCDEEGVRFQTTFLGSGAIAGILSATTLEIPDKKNVTIKDVLKENSIEATEESLLKLKYDPKSVWGYVELHIEQGPVLEQVGFPLGVVKGIAGQTRLKVTVKGSQGHAGTVPMSMRQDPMVAAAEQIVLMENLCKHPEEYLSYGGHCSDSSTKSLSSSLVCTVGEISTWPSASNVIPGQVTYTVDIRAIDDLGREAVIYDLSNRIYQICDKRSVSCLIEHKHDAGAVICDSELSSQLKSAAYSALKRMEDDIQDEVPILMSGAGHDAMAMSRLTKVAMLFVRCRGGISHSPQEDVLDNDIWAAGLATLSFLENL* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0583 479 SUPERFAMILY Bacterial exopeptidase dimerisation domain 258 390 IPR036264 -
Tpr5g0583 479 Pfam Peptidase dimerisation domain 258 369 IPR011650 -
Tpr5g0583 479 PANTHER ALLANTOATE DEIMINASE-RELATED 39 473 - -
Tpr5g0583 479 Gene3D Zn peptidases 61 469 - -
Tpr5g0583 479 TIGRFAM hydantase: amidase, hydantoinase/carbamoylase family 51 472 IPR010158 GO:0016813
Tpr5g0583 479 SUPERFAMILY Zn-dependent exopeptidases 42 479 - -
Tpr5g0583 479 PANTHER ALLANTOATE DEIMINASE-RELATED 39 473 IPR010158 GO:0016813
Tpr5g0583 479 ProSitePatterns ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 117 126 IPR001261 -
Tpr5g0583 479 CDD M20_bAS 52 477 - -
Tpr5g0583 479 Gene3D - 258 390 - -
Tpr5g0583 479 Pfam Peptidase family M20/M25/M40 118 468 IPR002933 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0583 Tpr-Chr5 8981474 8986633 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0583 K02083 - gmx:100819399 813.913