Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0546 ATGCAAGGAAGTTCAGAATCAACAACAATGGTAATAGAAACCCTAAAAAGTAAGGGTTGGTATTTGGAAGAAACCGACGATTTAAAGGCAATAATCGTTATTCAAACCGCATTAGCCGATGACCGTTCCAAGTTGTTAGAGTCTGTTGAATCCGAACTCCTCAACTCTGATCTCAGATCCATCGGAGCCAAATCCTTACCCGAACCATCTCTTCTTCGTAATAATCCTTCTTCTTTTCTTCATGGACCCAAAGTCCTTCAGGTATCTTCGGTGAGAGACATATCTATGAGCAAAATGGATAACATTTCAAGAAGTTCAAGTGGTCGGAGACTTCTCAGATTATGTCTCACCGATGGTCACTCCGAGATAACTGCCATAGAATATTCCCACATTCCATTTATACCTGACATTCTAGTTCCTGGTACTAAGATTCGTTTGGAAAATAAAGTTCCTGTACATAGTGGTATTGCTTGCTTAAATCCTAAAGCATTGACTGTATTAGGAGGTGTTGTTCAATCACTATATGAAGAATGGCAAATGAACCAAAAATATGCAGGATTCTCTCGGTCGTCTTTAAAACAGCTAGAGGATCGTGATACAGGTGGTCCTCCTGCATTTGTGAAGCTGCAGGTTGGACCTTCATCAGGTTTTGCTGATAATAACTCTAGAAGAAGTAAGCCCGTGGTTGGGGCTGGTAGAGCTGAGACAAGGCCAACTGGTATCCAGCAAGACCGAAATCTGAAAGAAGATATTTCGGACGCAAGTCTAAAATCAAAATTGCCACCAGAAAAAGCTGAAGACAAACCTAGTGGTTCAGGGTTAAAGCCAAAAGAAAGAGCTGAAGACAAACCTAGTAGTTCGGGGACTAGGCCAAAAGAAGTTGTGGAATCTATTCCGGTGCAAAATCAAGCAGCTGCCCAAAAATTACTACAGAAACTAAATCAACCAAATCAGCGTGATCGACATTCTAGGGGTCGGAGACATAGGGGCAAGGGTCAAGAAGATGATGAAGTTGTATTTACTCTGGAAGAATATGAAAAAAGAAAGGCCCAACAACATCCTTCTAATAAAGATAATGTTCTAGATATTAGCCATGATGAGCATCTTGCATGGCAGCTTCAGAATCAATTTAACCTCGAACATTCTCAGGTACAAAGCGGTCCTCGTGAATCTGAAGCAGATAATATTCGAATGAGCATGTTCACATACGAAAAGGATTCTGATGACAGCTATCAAATGGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGGGGTAGAGGAAGAGGGAGGGGAAGACATGGTTAA 1326 0.4163 MQGSSESTTMVIETLKSKGWYLEETDDLKAIIVIQTALADDRSKLLESVESELLNSDLRSIGAKSLPEPSLLRNNPSSFLHGPKVLQVSSVRDISMSKMDNISRSSSGRRLLRLCLTDGHSEITAIEYSHIPFIPDILVPGTKIRLENKVPVHSGIACLNPKALTVLGGVVQSLYEEWQMNQKYAGFSRSSLKQLEDRDTGGPPAFVKLQVGPSSGFADNNSRRSKPVVGAGRAETRPTGIQQDRNLKEDISDASLKSKLPPEKAEDKPSGSGLKPKERAEDKPSSSGTRPKEVVESIPVQNQAAAQKLLQKLNQPNQRDRHSRGRRHRGKGQEDDEVVFTLEEYEKRKAQQHPSNKDNVLDISHDEHLAWQLQNQFNLEHSQVQSGPRESEADNIRMSMFTYEKDSDDSYQMGRGRGRGRGRGRGRGRGRGRGRGRGRHG* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0546 441 MobiDBLite consensus disorder prediction 311 339 - -
Tpr5g0546 441 SMART DUF1767_2 12 103 IPR033472 -
Tpr5g0546 441 MobiDBLite consensus disorder prediction 211 297 - -
Tpr5g0546 441 PANTHER SURVIVAL OF MOTOR NEURON-RELATED-SPLICING FACTOR 30-RELATED 11 411 - -
Tpr5g0546 441 PANTHER RE01471P 11 411 - -
Tpr5g0546 441 MobiDBLite consensus disorder prediction 402 441 - -
Tpr5g0546 441 MobiDBLite consensus disorder prediction 418 441 - -
Tpr5g0546 441 MobiDBLite consensus disorder prediction 242 289 - -
Tpr5g0546 441 Gene3D - 57 187 IPR042470 -
Tpr5g0546 441 MobiDBLite consensus disorder prediction 402 416 - -
Tpr5g0546 441 Pfam RecQ mediated genome instability protein 41 179 IPR013894 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0546 K18404 - gmx:100782461 497.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0546 5 8143589 8154008 Tpr5g0546 5 8143589 8154008 ECH