Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0544 ATGGTTACAACTGCTTCAACATCTTCATTTTTTCCTGTTACATCATCTGATAATAATGGTGGAAAATCCTCCAAAAATGGAGGTAACTCATCTCTAAACCTTGGAGGATTGAAATCAAAACAAAGTTCTAATGGATTAAACATTAAGACAAATGCATCATCATCTTCCAAAATCAATGGAACAACCGTCGTTGCTGCTACGTCGACGCCTATTAAGGTTGAAAATGATTCGTCATCATCATCATCTTCGCAACATCACCCGAGAACATTCATCAATCAGTTACCTGATTGGAGTATGCTTTTAGCTGCTGTTACTACAATCTTCCTTGCTGCTGAAAAGCAGTGGATGATGCTTGATTGGAAGCCTAGACGGTCTGATGATATGCTTGTTGATCCTTTTGGTATAGGAAAAATTGTTCAAGATGGTCTTGTTTTTCGTCAAAATTTTTCAATTCGGTCGTATGAAATTGGTGCTGATAAAACCGCGTCTATAGATACGTTAATGAATCATTTACAGGAAACTGCGCTTAATCATGTTAAGACTGCTGGGCTTCTTGGTGATGGATTTGGTTCGACGCCAGAAATGTGCAAAAAGAACCTGATATGGGTTGTAACTCGGATGCAGGTTGTGGTTGATCGTTATCCGACGTGGGGTGATGTTGTTCAAGTAGACACTTGGGTTTCTGCAACTGGAAAGAATGGTATGCGTCGCGATTGGCTTTTGCGTGACAGCAAAACAGGTGAAATCTTGACAAGAGCATCCAGTGTTTGGGTCATGATGAATAAACTGACTCGGAAACTATCTAAAATTCCAGAAGAAGTCAGAGGAGAGATAGAGCCTTATTTTGTTAATTCTGATCCAGTTGTGGATGAGGATAACAGAAAACTAACTAAACTTGATGATACGGCTGAATATATTCGCACTGGTTTAACTCCCAGATGGAGTGATCTAGATGTTAATCAGCATGTTAATAATGTCAAGTACATTGGCTGGATTCTGGAGAGTGCTCCACAGCCAATTTTGGAGAGTCACGAGCTTCATTCCATGACTTTGGAGTACAGGAGAGAGTGTGGACGAAACAGTGTACTTGAGTCTCTGACTGATGTCTCCGGTGCTGACATTGGAAATTTAGCTGACAGCGGATTTGTTGAATGCAAACACTTGCTTCGACTCAATGACGGTGCCGAGATTGTGAGGGGTAGAACTGAGTGGAGACCAAAACCTGCCAACAATTTTGATATTTTGAATCAGGTTCCATCACAGAACACCTAA 1272 0.408 MVTTASTSSFFPVTSSDNNGGKSSKNGGNSSLNLGGLKSKQSSNGLNIKTNASSSSKINGTTVVAATSTPIKVENDSSSSSSSQHHPRTFINQLPDWSMLLAAVTTIFLAAEKQWMMLDWKPRRSDDMLVDPFGIGKIVQDGLVFRQNFSIRSYEIGADKTASIDTLMNHLQETALNHVKTAGLLGDGFGSTPEMCKKNLIWVVTRMQVVVDRYPTWGDVVQVDTWVSATGKNGMRRDWLLRDSKTGEILTRASSVWVMMNKLTRKLSKIPEEVRGEIEPYFVNSDPVVDEDNRKLTKLDDTAEYIRTGLTPRWSDLDVNQHVNNVKYIGWILESAPQPILESHELHSMTLEYRRECGRNSVLESLTDVSGADIGNLADSGFVECKHLLRLNDGAEIVRGRTEWRPKPANNFDILNQVPSQNT* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0544 423 CDD 4HBT 145 261 - -
Tpr5g0544 423 Pfam Acyl-ACP thioesterase 142 405 IPR002864 GO:0006633|GO:0016790
Tpr5g0544 423 Gene3D Hotdog Thioesterase 135 411 - -
Tpr5g0544 423 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 1 409 - -
Tpr5g0544 423 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 139 290 IPR029069 -
Tpr5g0544 423 MobiDBLite consensus disorder prediction 16 43 - -
Tpr5g0544 423 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 1 409 IPR045023 GO:0006633|GO:0016297
Tpr5g0544 423 Pfam Acyl-ATP thioesterase 1 131 IPR021113 GO:0016790
Tpr5g0544 423 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 303 404 IPR029069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0544 Tpr-Chr5 8110366 8114266 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0544 21 407 Acyl Lipid Metabolism Gene Families AT1G08510 77.835 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0544 K10781 - gmx:100170693 659.833