Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0342 ATGGGTTCTTGTTCTTCAGTTCAAAGAAAAAACAACAAAGACAACAACAATAACAATAACATGAAGCTAAAGAATGGATTTTTTGGTTCCAAAACTGAGAAAATTGTGATTCCACCATCACCCATTAAGGAACAACCCAAAAATGGTACCATTAAGTGGTCACCTTCTCAGTCAACGACCAATTACACTGATTTTGGTAGCAAAGAAGAAGCATTTTTTGATTCCAAGCCTTGGATTGACTCAGATTGTGAAGATGATTTCTATAGTGTCAATGGTGACTTTACACCGTCTCGCGGTAACACTCCAGTTCACCACAAGTTTGCAACACCTGGTGTGAACAAAACATCTCAGAATAAACCTTCATGTTCTTCATCTGAATCATCACCAGATAAGGGAAAAAAACTGTTGGAGCTATTCAAAGAAAGTGTGAAAGATAATAACCAAGATGATGATGGTAAAGAAAAGAAACAAGTGAAACCAACTATACAAGATGTTCTGCCTAAATCTTCAAACTCAACTCCTCGTCGCTCTGCCGCTAACTCTGCTTGCAGTAGTGAAAGAATCACGAGCGAGGATCGTGCATCGGTTAAGGATCAAAAGTCACCTAAATCTTCGGTGTTTTGTTTTCCGAGTTTGACTTCGTGCCGTAGCTTTAGAGAGAGGAGGAGTAAGACCAGTCCTGCAATTGCCGTAGATGGAAAAGTTTGA 708 0.3941 MGSCSSVQRKNNKDNNNNNNMKLKNGFFGSKTEKIVIPPSPIKEQPKNGTIKWSPSQSTTNYTDFGSKEEAFFDSKPWIDSDCEDDFYSVNGDFTPSRGNTPVHHKFATPGVNKTSQNKPSCSSSESSPDKGKKLLELFKESVKDNNQDDDGKEKKQVKPTIQDVLPKSSNSTPRRSAANSACSSERITSEDRASVKDQKSPKSSVFCFPSLTSCRSFRERRSKTSPAIAVDGKV* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0342 235 MobiDBLite consensus disorder prediction 130 161 - -
Tpr5g0342 235 MobiDBLite consensus disorder prediction 1 26 - -
Tpr5g0342 235 MobiDBLite consensus disorder prediction 47 61 - -
Tpr5g0342 235 MobiDBLite consensus disorder prediction 110 129 - -
Tpr5g0342 235 MobiDBLite consensus disorder prediction 94 204 - -
Tpr5g0342 235 PANTHER - 1 233 - -
Tpr5g0342 235 MobiDBLite consensus disorder prediction 163 189 - -
Tpr5g0342 235 MobiDBLite consensus disorder prediction 1 61 - -
Tpr5g0342 235 PANTHER OS01G0920100 PROTEIN 1 233 IPR038947 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0342 Tpr-Chr5 5182675 5185753 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0342 - - gmx:100306206 260.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0342 5 5182675 5185753 Tpr5g0342 5 5182675 5185753 ECH
Tpr6g2755 6 30070274 30074701 Tpr5g0342 5 5182675 5185753 PCT