Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0262 ATGACCATGAAGAGCAACAATAAGGATCAACAATATCTAAACTTTTTCAATGCTCAATTATATCTTTTCAATTTCTTTGGTCATATTCTAGTATTTGGTTGTGGTTTAGTCATAGGTATCACACTCACTTTTTGTGTCAAAAATTTTTCATTCAACTTTCAATTCCAACAATTTCAAGATCCATCTTTTATCTCTAATCCACCCCCTCATTTACCTCCTACACCTCCAATCTCATCAAACATCTCAAATCCATCAAATAACCTAACAAAAATTGCTATCAATCAAAATAATTTGGTTATTACCAACACTACTATTACTAACCCTAGTTCAAATGGGTTAGAAGATTTTTTGAAGATTCCAATGGCTATGCATGATATGAATGAAGATGAATTATTTTGGAGAGCTACTATGATTCCTATGATTCATAAAACACCATTCAAACAAACACCAAAGGTTGCATTTATGTTTTTGACAAAAGGTGGTGTTTTATTGGCTCCATTTTGGGAGAAATTCTTTAAAGGTAATGAAGGGTTGTATTCAATCTACATTCATCCAAATCCTTCTTTTAATGAAACGGTTTATGATCAAACCTCTATCTTTTATGGCCGTAGAATCCCTAGCAAGGAGGTAAAGTGGGGTGAGAATAGCATGATAGAAGCTGAGAGGCGTTTACTAGCAAATGCATTACTTGATTTCTCAAATCAACGTTTTGTATTACTTTCAGAATCATGCATACCATTGTTCAATTTCACCACAATCTACAATTATCTAATGAACTCAAAGAAAACTTTTATTGAAGCTAATGATATCGAAGGTAATGTAGGACGTGGAAGATACAACAACAAAATGAAACCATTGATTAAACTTTCACAATGGAGAAAAGGGTCACAATGGTTTCAAATTGATCGTAACATAGCTCTTAATATAGTTTCTGATAACTTATATTTTTCTATGTTCAAGAAATTTTGCAACCCTCCATGTTATAGTGATGAACATTATTTACCAACATTGGTTAGTATCAAATTTTGGAAGAGAAATTCTAATAGGACATTGACTTGGGTTGATTGGTCAAAAGGTGGACCCCATCCTTCAAAGTTTATTAGACCACATGTGACTATTGATTTTTTGGAGAGGTTAAGGTTTGGAAGTAGTTGTGAGTACAATGGAAAGATAACAAATGTTTGTCATTTGTTTGCTAGGAAATTCACTCCTCATGCTTTGGATAGATTGCTTAGATTTGCTCCGAAGTTGATGCAATTCAATTGA 1266 0.3294 MTMKSNNKDQQYLNFFNAQLYLFNFFGHILVFGCGLVIGITLTFCVKNFSFNFQFQQFQDPSFISNPPPHLPPTPPISSNISNPSNNLTKIAINQNNLVITNTTITNPSSNGLEDFLKIPMAMHDMNEDELFWRATMIPMIHKTPFKQTPKVAFMFLTKGGVLLAPFWEKFFKGNEGLYSIYIHPNPSFNETVYDQTSIFYGRRIPSKEVKWGENSMIEAERRLLANALLDFSNQRFVLLSESCIPLFNFTTIYNYLMNSKKTFIEANDIEGNVGRGRYNNKMKPLIKLSQWRKGSQWFQIDRNIALNIVSDNLYFSMFKKFCNPPCYSDEHYLPTLVSIKFWKRNSNRTLTWVDWSKGGPHPSKFIRPHVTIDFLERLRFGSSCEYNGKITNVCHLFARKFTPHALDRLLRFAPKLMQFN* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0262 421 Pfam Core-2/I-Branching enzyme 152 379 IPR003406 GO:0016020|GO:0016757
Tpr5g0262 421 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Tpr5g0262 421 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 7 420 IPR044174 GO:0016757
Tpr5g0262 421 PANTHER CORE-2/I-BRANCHING ENZYME 7 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0262 Tpr-Chr5 3794524 3798461 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0262 - - gmx:100791882 570.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0262 5 3794524 3798461 Tpr5g0262 5 3794524 3798461 ECH