Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0234 ATGGTGCGTCGAAAACGGGGACATCTTCCACCGGAAAGTTCAAGCTGTAATTATCAGTCAAAGCGAAGAAAACATTCTCGGTTCGAATATTCCAGCTCTAATCACGAATTATCTTCTTCTTCTAGAAAATGGGTTTTCTCTTCCGAAGATTGTTCTGACTGCAAAGATACGATTGTAGTTGTTTCATACAATATACTTGGTGTTGAAAATGCATCAAATCATTTGGATTTGTATTCTAATATCCCACGCCGCTTCTTGGATTGGGGTAGACGTAAGAAGCTTATACTTGAAGAGGTCAATAGCTATAGTGCAAGCATACTCTGTTTCCAGGAGGTTGATCATTTTGATGATTTGGATAATCTTTTTCAGAAAAATGGCTTTAAAAGTGTTTACAAGCCTCGCACAGGGGAAGCAAATGATGGATGTGCTATATTTTGGAAAGACAAATTATTCAATCTTTTGCATCACGAAGATTTAGAGTTCCAGAAATTTAGTATGCGTAATAATGTTGCTCAACTTTGTGTTTTGGAGGTAAACAATGATAATTCAGAATCTGACACAAGTAAACTAACAGCAGAGGAACAATCAACAAAAAACAAAAGATTTGTAATAGGAAATATACACGTGCTTTTTAACCCTAACCGTGGTGACATTAAACTTGGCCAGGTCAGACTTTTAATTGATAATGCTTACAAGTTATCACAAAAATGGGGCAACATCCCTGTTATTTTAGCTGGGGATATGAACAGTCTTCCACAGAGTGCAATATATAAATTTCTGTCTTCATCCAAGTTAGACATTCAATTACATGATCGCAGAAATATGTCAGGACAGCTTGAAATCCGGCCCAATAACAGAGTATTCCAATCGAAGATTGGTGATGATGCTAGCATTTCAATGTCGGTTTCAAGGCAACTGCTACCCAAATGGAGTGCGGAAGAACTAATCCTTGCAACTGGGGCAAAAGGAGTCACTCGTCTTCAGCACCAACTCAAGCTCCGCAGTGCTTATAGCGGTGTTCCTGGAAAGCATAGAACAAGAGATGATATTGGGGAGCCCTTGGCAACGTCATACCACTCTAAGTTCATGGGAACTGTTGATTATATCTGGCATTCCGAGGAACTTATCCCGATCAGAGTTCTTGAAACCTTGCCCGTTGATGTTCTTAGAAGAACTAGAGGACTCCCTAACGAGAAATGGGGAAGTGATCACCTCGCCATTGTATGTGAATTGGCCTTTGCAAAACGTGATGAAAGTTCCGATTCTTGTGATCTTCCCTAG 1281 0.3966 MVRRKRGHLPPESSSCNYQSKRRKHSRFEYSSSNHELSSSSRKWVFSSEDCSDCKDTIVVVSYNILGVENASNHLDLYSNIPRRFLDWGRRKKLILEEVNSYSASILCFQEVDHFDDLDNLFQKNGFKSVYKPRTGEANDGCAIFWKDKLFNLLHHEDLEFQKFSMRNNVAQLCVLEVNNDNSESDTSKLTAEEQSTKNKRFVIGNIHVLFNPNRGDIKLGQVRLLIDNAYKLSQKWGNIPVILAGDMNSLPQSAIYKFLSSSKLDIQLHDRRNMSGQLEIRPNNRVFQSKIGDDASISMSVSRQLLPKWSAEELILATGAKGVTRLQHQLKLRSAYSGVPGKHRTRDDIGEPLATSYHSKFMGTVDYIWHSEELIPIRVLETLPVDVLRRTRGLPNEKWGSDHLAIVCELAFAKRDESSDSCDLP* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0234 426 Pfam Endonuclease/Exonuclease/phosphatase family 61 404 IPR005135 GO:0003824
Tpr5g0234 426 Gene3D Endonuclease/exonuclease/phosphatase 31 423 IPR036691 -
Tpr5g0234 426 PANTHER PROTEIN ANGEL 20 413 - -
Tpr5g0234 426 SUPERFAMILY DNase I-like 56 412 IPR036691 -
Tpr5g0234 426 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 20 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0234 Tpr-Chr5 3416722 3423104 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0234 88 262 EF-hand Containing Proteins AT5G54130 27.174 2.11e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0234 - - vra:106769764 629.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0234 5 3416722 3423104 Tpr5g0234 5 3416722 3423104 ECH