Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0225 ATGACAGTGAAGCATTTTTGTATGGTGATGAGGATCAATATTGACTGCAATGGTTGTTATAGAAAAGTGAAGAGAGCCCTTCTTGAAATGCCAGAGTTGGAGAGCCATTTCCTAGAGAAGAAGCAAACAAGAGTAATTGTGTGTGGCAGTTTCATCCCTCAAGATGTTGCAATCAAGATAAAGAAAAAAACCAATCGAAGAGTTGAAATATTGGACATACAAGATTTGAGTGAAAACAATGATGAAATTATTGAAGATCAGAAACCAATTACTAGCCCCCAAAAACCAATTGAAAGAAATATGTTTGGTAGCTCGATAGAAACAAAGAGAGATATGCCTCCTCTCAACCATAGAGTTCACTACACATCAACTGTTTCTTATATTTAG 387 0.3592 MTVKHFCMVMRINIDCNGCYRKVKRALLEMPELESHFLEKKQTRVIVCGSFIPQDVAIKIKKKTNRRVEILDIQDLSENNDEIIEDQKPITSPQKPIERNMFGSSIETKRDMPPLNHRVHYTSTVSYI* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0225 128 SUPERFAMILY HMA, heavy metal-associated domain 9 68 IPR036163 GO:0046872
Tpr5g0225 128 Gene3D - 6 78 - -
Tpr5g0225 128 PANTHER OS08G0431150 PROTEIN 1 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0225 Tpr-Chr5 3264442 3265940 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0225 - - cam:101504022 210.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0225 5 3264442 3265940 Tpr5g0225 5 3264442 3265940 ECH