Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0215 ATGGAAGATGATGAATCACCACAACTCAAAAGTGTTGTTATAATTTCTCTTCCACCTTCAAATAACCCTTCTTTAGGTAAAAAAATCACCGCTTTTACTTTCTATAACCCTTTTTCCCGACAACCTCAACCCCAACAACAACAACAACCTCAAAACAATGATGTTTCATTCCAATCCTTCCCATCAAATCCTCAGAATCTGTTTTCATTCAGAAGACTCTTTCACAGTAACCCAATAAAGCTTTTCACTTTCTTTGGGGTTTTTCTCTTTGCCCTTTTTCTCTATGGTTCTCTTTATTCAACTGAAACAACACTTGAACTAAATCGTCTCAAGAATAATGATGGTGATGATGAACCTAGTTCCTTTCTGTTTCCCTTGTTTCCAAAACATGGTGTTGTTGGTCACAGGGATTTGAAGCTTGTTGATGTTAAAAGAAGGAACTTTGTTGCTTCTAATTCTAGGGTTGTGGCTGTTGATTCATCATCTACTGTTTTTCCAATCAGTGGCAATGTTTATCCAGATGGGTTGTATTACACACATTTACGTGTCGGTAACCCTCCAAAACGTTATTTTGTTGATGTGGATACTGGGAGTGACTTAACTTGGATTCAATGTGATGCTCCATGCAGAAGTTGCGCGAAGGGAGCAAATGCACCATACAAGCCAACAAGATCAAATATAGTTCCATCTATAGACTCTCTCTGCTTGGAAGTTCAAAAGAATGAATATCACGAAAGTTTCCAACAGTGTGACTACGAAGTTAAATATGCAGACCATAGTTCTTCCTTAGGAGTTCTTATTAAAGATGAGCTTCATCTTATGAGCACTAATGGATCCAAAACCAAGTTAAATTTTGTTTTCGGGTGTGGATATGATCAAGAGGGCTCTCTTTTGAACTCATTGGCAAAAACAGATGGAATCATGGGACTGAGCAAGGGGAAAGTTGGCCTACCTTATCAGTTGGCAAGTAAAGGGATTATTAAGAACGTCGTTGGTCATTGCTTAGGCAATGACAGAGTTGGTGGTGGATACATGTTCTTAGGTGATGATTTTGTACCTTATTGGGGTATGACTTGGGTGCCTATGGTCCAGACCACAGATTTATACCAAACTGAGATTCTTGGAGTAAATTACGGAAATCGTCAACTCAGTTTTGAAGGACACAACAAAGTAGGAAAGGTGGTTTTCGATAGTGGCAGTTCTTATACGTATTTCCCCAAAAAGGTGTACCAGGACCTTATTGCTTCGCTTAAAGAAGTTTCTGGGTTAGGACTCATTCAAGATGATTCTGATACAACTTTGCCGATTTGTTGGCAAGCTAATTTCCCAATCAGATCTGTCAAAGATGTCAAGGATTACTTCAAGACATTAACACTTCGTTTCGGAAACAAATGGTGGATTTTGTCCACATTGTTTCGGATACCGCCGGAGGGTTACTTGGTCATTAGTAACAAAGGCAATGTTTGTTTATCTATTCTTGATGGTAGCAATGTACATGATGGATCCTCAATTATACTTGGAGATATTTCATTGCGAGAATATTTGGTTGTGTATGACAATGTGAACAAGAATATTGGTTGGGAGCAAACCAAATGTAGCATGCCAAGTAGAATATTGAAGAAGACTCACAATTTCTTAAGTGATAGTATATTATGA 1656 0.3829 MEDDESPQLKSVVIISLPPSNNPSLGKKITAFTFYNPFSRQPQPQQQQQPQNNDVSFQSFPSNPQNLFSFRRLFHSNPIKLFTFFGVFLFALFLYGSLYSTETTLELNRLKNNDGDDEPSSFLFPLFPKHGVVGHRDLKLVDVKRRNFVASNSRVVAVDSSSTVFPISGNVYPDGLYYTHLRVGNPPKRYFVDVDTGSDLTWIQCDAPCRSCAKGANAPYKPTRSNIVPSIDSLCLEVQKNEYHESFQQCDYEVKYADHSSSLGVLIKDELHLMSTNGSKTKLNFVFGCGYDQEGSLLNSLAKTDGIMGLSKGKVGLPYQLASKGIIKNVVGHCLGNDRVGGGYMFLGDDFVPYWGMTWVPMVQTTDLYQTEILGVNYGNRQLSFEGHNKVGKVVFDSGSSYTYFPKKVYQDLIASLKEVSGLGLIQDDSDTTLPICWQANFPIRSVKDVKDYFKTLTLRFGNKWWILSTLFRIPPEGYLVISNKGNVCLSILDGSNVHDGSSIILGDISLREYLVVYDNVNKNIGWEQTKCSMPSRILKKTHNFLSDSIL* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0215 551 Gene3D Acid Proteases 355 534 IPR021109 -
Tpr5g0215 551 Gene3D Acid Proteases 151 349 IPR021109 -
Tpr5g0215 551 ProSiteProfiles Peptidase family A1 domain profile. 177 528 IPR033121 -
Tpr5g0215 551 PANTHER ASPARTYL PROTEASE APCB1 16 536 - -
Tpr5g0215 551 Pfam Xylanase inhibitor C-terminal 383 528 IPR032799 -
Tpr5g0215 551 SUPERFAMILY Acid proteases 169 533 IPR021109 -
Tpr5g0215 551 Pfam Xylanase inhibitor N-terminal 177 349 IPR032861 -
Tpr5g0215 551 PANTHER ASPARTYL PROTEASES 16 536 IPR001461 GO:0004190|GO:0006508
Tpr5g0215 551 PRINTS Pepsin (A1) aspartic protease family signature 183 203 IPR001461 GO:0004190|GO:0006508
Tpr5g0215 551 PRINTS Pepsin (A1) aspartic protease family signature 394 405 IPR001461 GO:0004190|GO:0006508
Tpr5g0215 551 PRINTS Pepsin (A1) aspartic protease family signature 504 519 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0215 Tpr-Chr5 3156555 3161693 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0215 160 532 Miscellaneous Gene Families AT1G77480 44.591 7.29e-106 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0215 - - cam:101497154 901.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0215 5 3156555 3161693 Tpr5g0215 5 3156555 3161693 ECH