Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0009 ATGATTCAACAATTGGTTGATCATGTCCTTGCTGTCATTAAAGAGTCAGTGAAGGCTATTACTACTGAGTCATTGAACAGTATTATTAGGATAATCAATGGAGTATCGGCACTTTTGTTGGCATTACTTCCTGGAAATGCTAAAATACTTGAAGGTATTCATGGTTGGGAACTCAGACCAACTTTCCGAGGACCACGGTTACCCCGATGGATGGAGAATGGTGCATCTTCATTCAATCAATTCATCTACGAACTTTCTGTGGATTCTGATAACTCAAGCTTCGAATACTCATCATCCGGAGAAGAAGATAGTGATAGATGTGAATGCCCTCCATCTCCCGCATCTTATAGTTCTAGAGCCTCCGATGCTGCCTATACTAAATTCAATAGGCATCAAATGAATTGGATCCAATATATATTACTTTGGATTTTACTTCCTATAAAATTTATGCTGAGGATTCCGCTTCGTCTTCTCCGGTTATCTTATTTTGTGGTGTCGAAAGCCCTACATGTCTCCAGAGAGAAACGCCCTCCACATTTACATGCATATAAGAGGGTGCAAAGCCTCAAGGAACACTTTATCCACCGTGCTACTGATAGGAGACGCGGCGTTGTAGAGGATCTTCATCTCGGCATAGAGATATGTATAGAATCTATCTTTGATGTTCTTCACAAGACAGCACATCTTGTTCTATCTCCGTCAAAAGCTTTTGGTGCATTATTCAGTTTGTTTTCATCTCATGGAAATGGAGTTAAAGAAAGTCGCAATTCTGTTGAGGATGCACCTACGGAGAAGATAACTAACTACGAGTCTCTGAATACAGATGCCCGTACATGTCAGGATGTCATAACAGATCTCGGGTATCCGTATGAAGCTATTAAGGTGATCACTGCTGATGGATATATTATTCTTTTGGAACGTATACCTAGACGAGATGCAAGAAAGGCTGTTTTTCTTCAGCATGGAGTTTTTGATTCATCAATGGGTTGGGTATCTAATGGTGTAGTTGGATCTCCAGCTTTTGCAGCCTATGATCAAGGGTATGATGTATATCTCGGGAATTTTCGTGGTTTGGTTTCCAGGGAACATGTCAATAAAAACATATCATCACGACAATACTGGAAGTACTCCGTCAATGAGCACGGGACGGAGGATATTCCTGCTATGATAGAGAAAATCCATCAAGTGAAAACAGCTGAATTGAAGCTTAGTACACCTGATACTGAGGACAAGATCGATGGGGATCAGCCTTACAAGCTTTGTGCAATTTCTCATAGTTTGGGAGGAGCTGCGATGATAATGTATATTGTTACTCGAAGGATAGAAGAGAAGTCACATAGACTTTCAAGATTGGTTTTATTATCTCCGGCCGGTTTTCATGACGACTCTAACATAGTTTTCTCCGCGGCAGAGATTCTATTATCTATTATGGCTCCTATTTTGTCTCGTGTTGTTCCTGCATTCTATATACCTACAAGATTTTTTCGCATGCTTGTCTTTAAGTTAGCTCGGGATCTTCATAACCTACCTGCAGTTGGAGGACTTGTTCAAACCCTAATGAGCTATGTTGTTGGCGGAGACAGTTCAAATTGGGTTGGAGTTTTAGGACTGCCACACTACAACATGAACGACATGCCAGGAGTGTCTTTTCGTGTTGCTCTCCATCTTGCACAGATTAAGCGTGTAGGAAGGTTCAGAATGTTCAATTATGGGAGTGCCTCCGCCAATAGAAAGGCGTACGGTTCACCTGAGCCTTTGGACTTAGGTGAACACTATGGACTCATTGACATTCCCGTTGATCTCGTTGCCGGACATAAGGACAAAGTTATAAGACCTTCAATGGTAAAAAGACACTATAGATTGATGAAAAATGCTGGTCTAAATGTTTCGTATAATCAGTTTGAATATGCTCATTTGGATTTCACATTCTCACATCGCGAAGAACTCTTGTCATATGTTATGTCACGCTTGTTGCTCGTTGATCCGAACTCTAAGCATCAAGCGAATCAAATGGTTGCAAAATCGGAGAGAAACAAACAAGGTGAAGCTAGCAAGTAG 2058 0.4106 MIQQLVDHVLAVIKESVKAITTESLNSIIRIINGVSALLLALLPGNAKILEGIHGWELRPTFRGPRLPRWMENGASSFNQFIYELSVDSDNSSFEYSSSGEEDSDRCECPPSPASYSSRASDAAYTKFNRHQMNWIQYILLWILLPIKFMLRIPLRLLRLSYFVVSKALHVSREKRPPHLHAYKRVQSLKEHFIHRATDRRRGVVEDLHLGIEICIESIFDVLHKTAHLVLSPSKAFGALFSLFSSHGNGVKESRNSVEDAPTEKITNYESLNTDARTCQDVITDLGYPYEAIKVITADGYIILLERIPRRDARKAVFLQHGVFDSSMGWVSNGVVGSPAFAAYDQGYDVYLGNFRGLVSREHVNKNISSRQYWKYSVNEHGTEDIPAMIEKIHQVKTAELKLSTPDTEDKIDGDQPYKLCAISHSLGGAAMIMYIVTRRIEEKSHRLSRLVLLSPAGFHDDSNIVFSAAEILLSIMAPILSRVVPAFYIPTRFFRMLVFKLARDLHNLPAVGGLVQTLMSYVVGGDSSNWVGVLGLPHYNMNDMPGVSFRVALHLAQIKRVGRFRMFNYGSASANRKAYGSPEPLDLGEHYGLIDIPVDLVAGHKDKVIRPSMVKRHYRLMKNAGLNVSYNQFEYAHLDFTFSHREELLSYVMSRLLLVDPNSKHQANQMVAKSERNKQGEASK* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0009 685 PANTHER LYSOSOMAL ACID LIPASE-RELATED 9 668 - -
Tpr5g0009 685 SUPERFAMILY alpha/beta-Hydrolases 277 654 IPR029058 -
Tpr5g0009 685 Gene3D alpha/beta hydrolase 268 658 IPR029058 -
Tpr5g0009 685 Pfam Partial alpha/beta-hydrolase lipase region 280 334 IPR006693 GO:0006629
Tpr5g0009 685 PANTHER ALPHA/BETA HYDROLASE FAMILY PROTEIN 9 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0009 Tpr-Chr5 123025 128697 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0009 2 663 Lipid Metabolism Gene Families AT1G18460 65.447 0.0 886
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0009 - - gmx:100785917 1070.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0009 5 123025 128697 Tpr5g0009 5 123025 128697 ECH
Tpr3g0374 3 4028548 4033073 Tpr5g0009 5 123025 128697 PCT