Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g0007 ATGGCTTTCAAAAAATCACTTATTCACTTCATCACCTTATCACTTTTCATCACAACATTCTCTCTTCTTCCATCTTCAACTTCATCTAGAATCACTCCATCATCACACACTTCACTTCTTGATGTCTCTTCATCAATTCAACAAACCAAACAAGTCCTTACTTTTAACCCTAAAAACAACACTCTTCTAGAATCTTCTTCTATGCAACAAAAACCCATTTCAAATTCTTCAACTTCATTCTCAATTCTCATACACCCAAGAGAGACCCTTTTGAATGAAAACCACAAAGACTATAAAAATCTAATCTTGTCTCGACTCGCTCGTGACTCAGCTCGAGTCAACTCACTCAACATAAAACTCAAACTTGCTATCAACAACATAAAAAAATCGGATCTTCACCCGACCCAAACGGAGCTCCAACAAGAAGATCTCTCTACACCTGTTTCCTCCGGCATCAGCGCCGGCTCCGGCGAGTATTTCACTCAACTCGGAATCGGTCAACCCGCTAAACCCTTTTACATGGTTCTCGATACAGGAAGTGATGTTAACTGGATCCAATGCAAACCCTGCTCCGATTGTTACCAACAATCCGACCCGATTTATGACCCGACTTCATCTTCAACCTACGAATCCTTAACCTGCGAAACACAACAGTGTCAACAATTAGATACTTCAGCTTGTCGTGACGGTAAATGTCTCTACCAAGTTGCCTATGGCGATGGTTCTTTTACCGTCGGTGAATATATAACAGAAACCGTTTCGTTTGGTGGATCCGGGTCATTGAACCGGGTCGCAATTGGTTGTGGCCATGATAATGAAGGTTTATTCGTCGGAGCTGCTGGTTTACTTGGACTCGGTGGTGGGTCACTCTCTTTAACTTCACAAATCAAAGCTACATCGTTTTCATATTGTTTAGTTGATCGTAACTCAGCAAAATCGTCCACTCTCGATATCAACTCGGTCCAACCCAGTGACTCAGTAACAGCAAAGTTGATAAAAAATCAAAAAGTTGACACGTTTTACTTCATGGACCTCACCGGAATTAGCGTCGGAGGTCAGTTGATTTCCATTCCGCCGCAAGTTTTTGCCGCCGATGGATCTGGTAATGGTGGGATTATTATTGACTCGGGAACAGCGATAACTCGGTTACAGACTCAAGCATATAACTCGCTTCGTGACTCGTTTAAAAAACTTACTCAGAATTTACGTTCTGCTGAAGGTTTTGCTTTGTTTGACACGTGTTATGATTTGTCTAATTTGCAAAGTGTTCGTGTTCCTACGGTGTCGTTTCATTTTAGTGAAAATAAGGTTTGGAATTTGCCGGCGAAGAATTACTTGATTCCGGTGGATACCGCCGGAACTTTCTGTTTTGCTTTTGCTCCGACACCGTCGTCTTTGTCTATTATTGGAAATGTTCAACAACAAGGGACACGTGTCAGCATTGATCTTGTGAACTCTTTGATTGGATTCTCACCCAACAAATGCTAG 1488 0.4187 MAFKKSLIHFITLSLFITTFSLLPSSTSSRITPSSHTSLLDVSSSIQQTKQVLTFNPKNNTLLESSSMQQKPISNSSTSFSILIHPRETLLNENHKDYKNLILSRLARDSARVNSLNIKLKLAINNIKKSDLHPTQTELQQEDLSTPVSSGISAGSGEYFTQLGIGQPAKPFYMVLDTGSDVNWIQCKPCSDCYQQSDPIYDPTSSSTYESLTCETQQCQQLDTSACRDGKCLYQVAYGDGSFTVGEYITETVSFGGSGSLNRVAIGCGHDNEGLFVGAAGLLGLGGGSLSLTSQIKATSFSYCLVDRNSAKSSTLDINSVQPSDSVTAKLIKNQKVDTFYFMDLTGISVGGQLISIPPQVFAADGSGNGGIIIDSGTAITRLQTQAYNSLRDSFKKLTQNLRSAEGFALFDTCYDLSNLQSVRVPTVSFHFSENKVWNLPAKNYLIPVDTAGTFCFAFAPTPSSLSIIGNVQQQGTRVSIDLVNSLIGFSPNKC* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g0007 495 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 174 185 IPR001969 GO:0004190|GO:0006508
Tpr5g0007 495 ProSiteProfiles Peptidase family A1 domain profile. 159 491 IPR033121 -
Tpr5g0007 495 SUPERFAMILY Acid proteases 152 495 IPR021109 -
Tpr5g0007 495 PANTHER PROTEIN ASPARTIC PROTEASE IN GUARD CELL 1 16 495 - -
Tpr5g0007 495 Pfam Xylanase inhibitor N-terminal 159 316 IPR032861 -
Tpr5g0007 495 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 372 383 IPR001969 GO:0004190|GO:0006508
Tpr5g0007 495 Gene3D Acid Proteases 133 315 IPR021109 -
Tpr5g0007 495 PANTHER ASPARTYL PROTEASES 16 495 IPR001461 GO:0004190|GO:0006508
Tpr5g0007 495 Pfam Xylanase inhibitor C-terminal 341 491 IPR032799 -
Tpr5g0007 495 Gene3D Acid Proteases 316 495 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g0007 Tpr-Chr5 102229 104329 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g0007 136 495 Miscellaneous Gene Families AT1G77480 26.173 4.72e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g0007 K22683 - gmx:100784849 671.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g0007 5 102229 104329 Tpr5g0007 5 102229 104329 ECH