Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4792 ATGGGTAAGCAACTTTTGTTACTAACTCTCATTCTTCATCTTCTCTTTGCAACACTCTCAGCTGCACCTTCCAACACTTCACCTGCAAAAATTGTTTCTGGGTTTCTCTCCAATGCCGTTCCTGCTTTTACCAAATGGGTTTGGTCCCTTAAAGCTACCTCCAAAACTGGGGTTTTGAGCAAGTCAATGATGAAGTTTGAGAGTGGTTACAATGTGGAGACTGTGTTTGATGGAAGCAAGCTTGGAATTGAGCCTTATACTGTTGAGGTTTTGCATAATGGAGAACTTCTCATTCTAGATTCTGCTAATAGTAACCTTTATAGAATCTCCTCATCACTCTCTTTGTATAGCAGACCGAAACTGGTGGCTGGATCAGCCGAAGGATATTCTGGACATGTTGATGGAAGGCTCAGGGAGGCTAGGATGAACCACCCAAAAGGGATAACCGTTGATGACCGAGGAAATATTTATGTTGCAGATACTATAAATATGGCAATTAGGAAAATTAGTGATTCAGGGGTCACAACAATTGCTGGAGGAAAATGGAGCCGCGGAGGGGGCCATGTTGATGGACCAAGTGAAGAAGCTAAATTTTCTGATGACTTTGATGTGGTTTATGTTGGAAGTAGCTGTTCTCTACTTGTTGTAGACAGAGGAAACCAAGCCATCAGGGAGATCCCACTCCACTTTGATGATTGTGCATATCGATATGGCAGTGATTTCCCTCTTGGGATTGCAATGCTTGTTGGGGCTGGCTTCTTTGGTTATATGCTTGCATTGCTGCAGCGTAGACTCGGTGCAATCGTAGAATCTCAGGATGCTCAGGTTCCAGTAACAATAATGCCTTCTGTTTCTCCAAGTGCATATCAAAACCCGTTGAAATCTGTAAGGCCTCCTTTAATTCCATCAGAATATGAACCCGAAAAGCAGGAAGAAGGTTTCTTTGGGTCTCTCGGGAAGCTTCTTTCTGATGCCGGGGTATCAATGGTGGAGATAATGGGAGGATTATTTGCTGTTTTCAGAAGAAGACCACAGAGCTACCAATATCAAAGGCAAACACTTATCCAACAACCTCAGAAGCTAGTTAATGATTGGCCAGCACAGGAAAGTTTTGTGATTCCTCGCGAAGATGAGCCGCCATCTATTGACACAAGAGCACCAACACCTCGAAAAACCTATCCTTTCATGTCAAAAGATGCAGAAAAAATGCAACAATTACGGCAAAGTAAAGCATTTTATAGTGGGTGGGATGGAGATCAGCAGCAACAGCAGCAGCAGCAGCAGCATCATCAACAGCAGCAGCAACAGCAACAAACACATCATCATCGCCATCAGTACCAATCATCGGTCCCTCGCACTTTCTACGAGCAGAGCAATGAGGCAACTAATGAGGTAGTTTTCGGCGCAGTGCAGGAACAGGAGGGGAAGAAGGAATCTGTGGTCATCACGCCGGTTGAATACGGAGGTTCACTGTACGAACATCGTGATATGCGGTCTCGAATGAGTTCCATGGGTTATAATTACTCCCATAAGTATTGA 1539 0.4418 MGKQLLLLTLILHLLFATLSAAPSNTSPAKIVSGFLSNAVPAFTKWVWSLKATSKTGVLSKSMMKFESGYNVETVFDGSKLGIEPYTVEVLHNGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGRLREARMNHPKGITVDDRGNIYVADTINMAIRKISDSGVTTIAGGKWSRGGGHVDGPSEEAKFSDDFDVVYVGSSCSLLVVDRGNQAIREIPLHFDDCAYRYGSDFPLGIAMLVGAGFFGYMLALLQRRLGAIVESQDAQVPVTIMPSVSPSAYQNPLKSVRPPLIPSEYEPEKQEEGFFGSLGKLLSDAGVSMVEIMGGLFAVFRRRPQSYQYQRQTLIQQPQKLVNDWPAQESFVIPREDEPPSIDTRAPTPRKTYPFMSKDAEKMQQLRQSKAFYSGWDGDQQQQQQQQQHHQQQQQQQQTHHHRHQYQSSVPRTFYEQSNEATNEVVFGAVQEQEGKKESVVITPVEYGGSLYEHRDMRSRMSSMGYNYSHKY* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4792 512 SUPERFAMILY NHL repeat 71 229 - -
Tpr4g4792 512 MobiDBLite consensus disorder prediction 416 449 - -
Tpr4g4792 512 PANTHER - 1 509 - -
Tpr4g4792 512 Pfam NHL repeat 143 168 IPR001258 GO:0005515
Tpr4g4792 512 MobiDBLite consensus disorder prediction 371 396 - -
Tpr4g4792 512 Gene3D - 27 227 IPR011042 -
Tpr4g4792 512 PANTHER NHL REPEAT PROTEIN 1 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4792 Tpr-Chr4 56904265 56908140 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4792 - - mtr:MTR_8g063760 857.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4792 4 56904265 56908140 Tpr4g4792 4 56904265 56908140 ECH