Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4771 ATGGAGGAGCAACAACAACAACAACGGAAAGGTCCTATTCCTCTCGACTGGGACACGCTTCTCGATGAAACGCCGGCGGCGGAAATCTTCGTGAAACCCTCTGCTATGGCTTCCGATCAGGAGCCTCAGTCCTTTGTCCCCGGCCTCGAAGACCTCAAAGATTGCGAGCTTCATGAACAAATTCGGAGAAAGAAGAATAGTCTCAATACCGCCGGTAAAAAATTGCCGGACCGAGGTGCCAAACTTCGCGCTGTCATCAGGTGCTATGAAGAAGAGGTTCATAGACGGAAAGTCAACCCTCCTCCGCAGAAAGTTGAAGAGAAGCAGGCTACTACCAGCTCAGATTCAGTTGGTGTGTCTAATAAATCGAGACAAGAGAATTCGCCATCTCGTCCACAGTCAGAACCCTCTTTTGCATCTTGCCTTATGAAGAAATTGGATGATAAAAATACTAATTGTACAGCTGTTGATGCATTTAGCAATGAGAAGCAATATTTCAAGCATTGTAACAACCAGACAGTACGACCCAACAGAGAACGTAAAAGAGGAAAGAGACATCGATCATCTTCAAGACAATTGCCATTTAAAAGCCCCAGGAAACTTTCCATACGTGATACTTTTAGTGATGATAAAAGGTGCCAAGCCAATTCTGTCTTATCCCTACAGACTATTACAAGGAATCTAGAAAGACGCTACTCAAAAGATAAGGGTGCTTCTCAGGCAATTCTGTCAGATGGCTCAAGGTCTAGGAAGGGTCAACCCATTGTTGTTGATGACGACGACGATGATGAGGAAGATGATGACAGCGAAGATCCTCGTATTCTGGAGAGAACAGAAAACAAAGTTCCTGAATATTTGAAAGAAGCTAAGGTCTATTTTCCATCAAGAGATGATCCCGAGTGTGTTGAAATTTGTTACAACGACATGGAATGCCTTGCTCCTGAAGGCTACTTAACATCAACTATCATGAACTTTTACATGCGATATTTGCAGCAGCGAGTATCTCTGACAATATTAGACTGCTGCCATTTTTTCAACACATATTTCTACAAGAAACTTACAGAAGCTGTATCCTGCAAGGAAAGTAACAGAGAGACAATCTTCGCAAAGTTCAGGAGGTGGTGGAAGGGTGTTAATATTTTTCAAAAGGCATATGTTTTGATTCCAATACACCAGGATTGTCATTGGAGCTTGATCATTATATGTATCCCAGACAAAGATGAATCAGGACCAATCATACTTCATTTGGATTCTTTGGGTCTTCACTCAAGTGAATCAGTTTTTGATAATATTAAAAGCTATTTGATCGAAGAAAAGAACTATTTGAGTCGAGAGTGTGCTTCTTCAGATGTTCCGATTGCAGACAGAATATGGAAGTCTCTTTCTCGCAGAATTGAAACTCGAGTCATAGCCTTTAGCAAGAAGTGGTTCGAAGCTGAAGAGGCATCCAATTTGAGAGCAAAAATCCACAAGTTGCTTGTAGCAGAACTACATAATTCAATCAAGCCTAACGGCGTAACAGCATCTTCCCCTTCATCTGATGCCAATGCAACCGAATGCGTTGAGACTGCCAAGGACTCTTCGTTCGAAGATGGCATCATGAGTTGCAATTCTGAAATAATTGAATGA 1629 0.4205 MEEQQQQQRKGPIPLDWDTLLDETPAAEIFVKPSAMASDQEPQSFVPGLEDLKDCELHEQIRRKKNSLNTAGKKLPDRGAKLRAVIRCYEEEVHRRKVNPPPQKVEEKQATTSSDSVGVSNKSRQENSPSRPQSEPSFASCLMKKLDDKNTNCTAVDAFSNEKQYFKHCNNQTVRPNRERKRGKRHRSSSRQLPFKSPRKLSIRDTFSDDKRCQANSVLSLQTITRNLERRYSKDKGASQAILSDGSRSRKGQPIVVDDDDDDEEDDDSEDPRILERTENKVPEYLKEAKVYFPSRDDPECVEICYNDMECLAPEGYLTSTIMNFYMRYLQQRVSLTILDCCHFFNTYFYKKLTEAVSCKESNRETIFAKFRRWWKGVNIFQKAYVLIPIHQDCHWSLIIICIPDKDESGPIILHLDSLGLHSSESVFDNIKSYLIEEKNYLSRECASSDVPIADRIWKSLSRRIETRVIAFSKKWFEAEEASNLRAKIHKLLVAELHNSIKPNGVTASSPSSDANATECVETAKDSSFEDGIMSCNSEIIE* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4771 542 PANTHER UBIQUITIN-LIKE PROTEASE 4-RELATED 50 470 - -
Tpr4g4771 542 PANTHER UBIQUITIN-LIKE PROTEASE 4-RELATED 472 518 - -
Tpr4g4771 542 MobiDBLite consensus disorder prediction 168 201 - -
Tpr4g4771 542 MobiDBLite consensus disorder prediction 231 278 - -
Tpr4g4771 542 ProSiteProfiles Ubiquitin-like protease family profile. 302 457 IPR003653 GO:0006508|GO:0008234
Tpr4g4771 542 MobiDBLite consensus disorder prediction 258 272 - -
Tpr4g4771 542 MobiDBLite consensus disorder prediction 178 193 - -
Tpr4g4771 542 PANTHER UBIQUITIN-LIKE PROTEASE 4 50 470 - -
Tpr4g4771 542 PANTHER UBIQUITIN-LIKE PROTEASE 4 472 518 - -
Tpr4g4771 542 MobiDBLite consensus disorder prediction 105 137 - -
Tpr4g4771 542 MobiDBLite consensus disorder prediction 91 137 - -
Tpr4g4771 542 Pfam Ulp1 protease family, C-terminal catalytic domain 317 439 IPR003653 GO:0006508|GO:0008234
Tpr4g4771 542 Gene3D - 293 341 - -
Tpr4g4771 542 SUPERFAMILY Cysteine proteinases 294 494 IPR038765 -
Tpr4g4771 542 Gene3D - 342 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4771 Tpr-Chr4 56284792 56297817 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4771 K16287 - gmx:100790705 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4771 4 56284792 56297817 Tpr4g4771 4 56284792 56297817 ECH