Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4769 ATGCAGAAACAACTTTGTCACACAATCTTTATCTTCACTAATATCCTTCTTTCCACACTCACCGTTGGTTTGACGGTAGATTATGCAGAAATGAAAAACCAAACTCAGTTCACTCCAAAGGCCTTTGTAATTCGCTATTGGAATAGAGTGATCAAAAACAACTTGCCAAAGCCATCCTTCGTCCTCTCGAAGGTGTCACCCCTTAGTGCCGCCGACGCATCTTGTTTTGCAAAGCACGCGGGCACCAACACACTATCCACAAAGTTGTCGGAATTCTGCTCTGCCGCACACCTCCTCTGCTTCCCGGATATAAATCCACAAAGTTACCGTAAAGGAGTTGTTTTAGACAAGACGCTTAGCTTCACAAGTTACGGTGTTACTAACCCTTTCGAAGATTATGTCAAGAAAGGTATGTTATTTATCTCCTACACTAAATCTTCTTCTACTAACTCAATTACTAGTTTGGTAAAAAAATTGGTTCAGTCGGGTAAGTTTTTCCGCGAAAGGATGTTGAAGCAAGGGATGGTTATGCACATGCCAGATATAAGGGACAAATTACCAGAAAGATCATTTTTGCCTCGCTCCATTTTGACCAAATTGCCCTTTGCATCTTCCAAGTTAGACGATATGAAGCAAGTTTTCAAGGTGTCTAAGAATTCTTCTATGGAAAAGATGATAGTGAACTCATTGAGAGAATGTGAGAGGGTGCCGAGTAAGGGTGAGGTTAAGCGTTGTGTGGGTTCACTTGAGGATATGATTGACTTTGCAACTTCTATTTTAGGCCGCAATGTGACGGTTCAATCCACTCAGAATGTAAATGGGTCGAATAAGAATGTTATGTTAAGTCAAGTTAGAGGAATAAACCATGGGAAAGTTATAGAGTCTGTATCTTGTCACCAGACCATGTTTCCTTACTTATTATACTATTGTCACTCAGTTCCTAAGGTTCGAGTTTATGAAGCGGATCTTTTAGACCCTCAGTCTAAGGTCAAGATTAATCGCGCTGTTGCAATCTGCCACTTGGACACAACATCTTGGAGCCCCACCCATGGTGCATTTGTGGCACTTGGATCCGGTCCGGGTCGGATCGAAGTGTGTCATTGGATCTTTGAGAATGATATGATCTGGACTGTCGCTGATTGA 1143 0.4199 MQKQLCHTIFIFTNILLSTLTVGLTVDYAEMKNQTQFTPKAFVIRYWNRVIKNNLPKPSFVLSKVSPLSAADASCFAKHAGTNTLSTKLSEFCSAAHLLCFPDINPQSYRKGVVLDKTLSFTSYGVTNPFEDYVKKGMLFISYTKSSSTNSITSLVKKLVQSGKFFRERMLKQGMVMHMPDIRDKLPERSFLPRSILTKLPFASSKLDDMKQVFKVSKNSSMEKMIVNSLRECERVPSKGEVKRCVGSLEDMIDFATSILGRNVTVQSTQNVNGSNKNVMLSQVRGINHGKVIESVSCHQTMFPYLLYYCHSVPKVRVYEADLLDPQSKVKINRAVAICHLDTTSWSPTHGAFVALGSGPGRIEVCHWIFENDMIWTVAD* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4769 380 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 13 110 - -
Tpr4g4769 380 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 116 380 - -
Tpr4g4769 380 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 116 380 - -
Tpr4g4769 380 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 13 110 - -
Tpr4g4769 380 SMART BURP_2 163 379 IPR004873 -
Tpr4g4769 380 Pfam BURP domain 165 377 IPR004873 -
Tpr4g4769 380 ProSiteProfiles BURP domain profile. 165 379 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4769 Tpr-Chr4 56265297 56267331 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4769 - - mtr:MTR_8g064500 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4769 4 56265297 56267331 Tpr4g4769 4 56265297 56267331 ECH
Tpr2g1733 2 20494658 20497512 Tpr4g4769 4 56265297 56267331 PCT