Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4754 ATGGCAGATTCTGTTGATGTGACTACTCACGATGTTCTCTCCATTCTCTCTTCTCCCGGTACACATTTTCTTCTCAAAAACAACGCTGATCAGGTTGGAATTGATAGTTTGAAGGGGAAGAAAATCGGTTTCTATTTTTCAGCTTCATGGTGTGGTCCGTGTCAAAGATTCACTCCAATATTGGCAGAGGTGTACAATGAACTCTCTCCAAACGGTGACTTTGAGGTTGTTTTTGTCTCAGCTGATGAAGATGAGGAGGCCTTTAAGAATTACTTTTCCAAGATGCCGTGGTTGGCTATACCATTTTCTGATACAGAGACACGCAACAGCCTTGATGAATTGTTTCATGTAAATGGCATTCCTCATCTTGCATTGCTTCATGAAACTGGGAAAGTTATTACTGAAGATGGAGTTGACATTATCCGTGATTATGGAGCTGAAGGATACCCTTTCACATCGGAAAGGGTCCAAGAGTTGAAAGATCAAGAAGAGGAAGCTAAGAGGAACCAGTCCTTGAGATCTCTATTGGTATCTCGTTCCCGTGACTTTGTGATATCATCCGATGGAAACAAAATACCTATTTCCGAGCTTGAGGGAAAGACAGTTGGTCTGTATTTCTGTGCAACTTCATACAGATCATGCGCGTTATTTACTCAAAAGCTTAAGGACGTTTACAAGAAGCTGAAGGAAAAAGGGGAGAACATCGAGGTTGTGTTTATACCCTTAGATGATGAGGAAGAGTCATTGAAGAAAGAGTTAGAAAGTTTGCCTTGGTTATCCTTGCCTATCAAGGACAAAACCTGTGCAAAACTAATTCAATACTTTGAGCTCTCAGAACTCCCGACTTTAGTTATTATTGGGCCAGATGGGAAAACTCTTCATCCTAATGTCGCTGAGGCCATTGAAGATCATGGAATTGATGCATATCCGTTCACTCCTGAAAAGTTTGTCGAACTCGATGAAATTGCAAAGGCTAAAGAAGCAACTCAAACTCTTGAGTCAGTTTTGGTGTCTGGGGGTCAAGACTTTGTCATTAAGAATGGCGGGGAGAAGATTCCAGTGTCAGAATTAGAGGGGAAGACCGTCCTCCTCTACTTCTCAGCCCACTGGTGTCCTCCATGCCGAGCATTTCTTCCAAAACTCATTGATGCATACCATAAGATTAAGGCACAAGACAAGGACACACTTGAAGTCGTTTTCCTCTCAAGCGACAGAGATCAAGACTCTTTTGATGAATTCTTTGCAGGAATGCCATGGTTGGCACTTCCCTTTGGTGATTCAAGGAAAGAAATCCTGAGTCGCAAATTCAAGGTATCTGGAATCCCCATGCTCGTTGCGATTGGACCAAGTGGCCGGACTGTCACCAAAGAAGCTCGAGATCTGATTGGGCTATATGGGGCAGATGCATATCCTTTCACTGAGGAGAGAATTAAAGAAATAGAGGCAAAAAATGATGACATTGCAAAGGGGTGGCCTGAGAAGGTGACACATGAAACACATGAGCACGAGCTTGTATTATCGCGCCGTAGGATTTATTATTGTGATGATTGCAATAAAGAGGGACATATTTGGTCATACTTCTGTGAAGAATGTGACTTTGATCTCCATCCAAATTGTGCACTGGGAGACAAAGGAAGCGTAAATTCCAAGGAAGAAGAGAAGCCCAACGATGGATGGGTTTGTGATGGAGATGTCTGCACCAAAGCTTGA 1710 0.4275 MADSVDVTTHDVLSILSSPGTHFLLKNNADQVGIDSLKGKKIGFYFSASWCGPCQRFTPILAEVYNELSPNGDFEVVFVSADEDEEAFKNYFSKMPWLAIPFSDTETRNSLDELFHVNGIPHLALLHETGKVITEDGVDIIRDYGAEGYPFTSERVQELKDQEEEAKRNQSLRSLLVSRSRDFVISSDGNKIPISELEGKTVGLYFCATSYRSCALFTQKLKDVYKKLKEKGENIEVVFIPLDDEEESLKKELESLPWLSLPIKDKTCAKLIQYFELSELPTLVIIGPDGKTLHPNVAEAIEDHGIDAYPFTPEKFVELDEIAKAKEATQTLESVLVSGGQDFVIKNGGEKIPVSELEGKTVLLYFSAHWCPPCRAFLPKLIDAYHKIKAQDKDTLEVVFLSSDRDQDSFDEFFAGMPWLALPFGDSRKEILSRKFKVSGIPMLVAIGPSGRTVTKEARDLIGLYGADAYPFTEERIKEIEAKNDDIAKGWPEKVTHETHEHELVLSRRRIYYCDDCNKEGHIWSYFCEECDFDLHPNCALGDKGSVNSKEEEKPNDGWVCDGDVCTKA* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4754 569 PANTHER THIOREDOXIN 4 541 - -
Tpr4g4754 569 SUPERFAMILY Thioredoxin-like 24 133 IPR036249 -
Tpr4g4754 569 CDD TryX_like_TryX_NRX 342 472 IPR045870 GO:0004791
Tpr4g4754 569 ProSitePatterns Thioredoxin family active site. 363 381 IPR017937 -
Tpr4g4754 569 SUPERFAMILY Thioredoxin-like 347 455 IPR036249 -
Tpr4g4754 569 SUPERFAMILY Cysteine-rich domain 491 543 IPR046349 -
Tpr4g4754 569 Pfam C1 domain 499 540 IPR004146 -
Tpr4g4754 569 ProSiteProfiles Thioredoxin domain profile. 14 165 IPR013766 -
Tpr4g4754 569 Gene3D Glutaredoxin 175 312 - -
Tpr4g4754 569 Gene3D Glutaredoxin 17 153 - -
Tpr4g4754 569 Gene3D Glutaredoxin 336 473 - -
Tpr4g4754 569 CDD TryX_like_TryX_NRX 23 151 IPR045870 GO:0004791
Tpr4g4754 569 PANTHER NUCLEOREDOXIN 1-2-RELATED 4 541 - -
Tpr4g4754 569 SUPERFAMILY Thioredoxin-like 185 294 IPR036249 -
Tpr4g4754 569 Pfam Thioredoxin-like 39 132 IPR012336 -
Tpr4g4754 569 Pfam Thioredoxin-like 359 452 IPR012336 -
Tpr4g4754 569 Pfam Thioredoxin-like 199 291 IPR012336 -
Tpr4g4754 569 ProSiteProfiles Thioredoxin domain profile. 319 482 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4754 Tpr-Chr4 56081220 56084308 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4754 K17609 - gmx:100809224 858.211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4754 4 56081220 56084308 Tpr4g4754 4 56081220 56084308 ECH