Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4748 ATGGCTGAAAACAAAGACATTGAAACTGTTATCAGGAGAGTAACCTCTGTAACCAACCACCTCATTTCCTCTCCAACAACATCACCACCTCAACTTATTTCCTTGTTTCACACTTCGGGGAGTTCTAGGAATAATGATAGCTACCAACGTGTTCATGGTGATGTTCCCTCTCATGATGTTGTTTGGAAGGTTGCTTCTGATGATCAAGGACAGGATTTCACTGACATTGTTTATGAGAAATCTGTTGGTGAAGGAATTGCTAAGATTAGTATAAATAGGCCAGAGAGAAGGAATGCTTTTCGACCTCACACGGTTAAGGAGCTTATTCGTGCTTTCAATGATGCTAGAGATGATCCCTCTGTTGGTGTCATCATTCTCACTGGAAAAGGAACAAATGCATTTTGTAGTGGTGGTGACCAAGCCTTGAGGACTGGAGATGGTTATTCTGATCATGAAAATATCGGTCGCCTTAATGTGTTAGACTTACAGGTGCAGATTCGCCGCCTTCCAAAACCAGTAATTGCAATGGTTGCAGGGTATGCTGTTGGAGGAGGGCATGTATTACATATGGTTTGTGATTTAACCATTGCAGCAGATAATGCTATTTTCGGCCAAACCGGTCCTAAGGTTGGAAGCTTTGATGCTGGTTACGGAAGTTCTATCATGTCGCGTTTGGTTGGTCCGAAAAAAGCACGCGAAATGTGGTTTCTCGCAAGATTCTATACGGCTGTCGAAGCAGAGAAAATGGGCCTTATCAATACTGTTGTACCACTAGAGAACTTAGAAAAAGAAACAATCAAATGGTGTAGGGAGATACTCAGAAATAGCCCAACTGCAATTCGGGTTCTCAAGGCTGCTATTAATGCAGTTGACGATGGCCATGCCGGACTTCAGGAAATGGGTGGAAATTCAACATTGATATTTTATGGCACTGAAGAAGCAAATGAAGGTAAAACTGCATATATGGAGCGTAGACGCCCAGATTTTTCTAAGTTTAATAGAAGACCATAA 1011 0.4204 MAENKDIETVIRRVTSVTNHLISSPTTSPPQLISLFHTSGSSRNNDSYQRVHGDVPSHDVVWKVASDDQGQDFTDIVYEKSVGEGIAKISINRPERRNAFRPHTVKELIRAFNDARDDPSVGVIILTGKGTNAFCSGGDQALRTGDGYSDHENIGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLARFYTAVEAEKMGLINTVVPLENLEKETIKWCREILRNSPTAIRVLKAAINAVDDGHAGLQEMGGNSTLIFYGTEEANEGKTAYMERRRPDFSKFNRRP* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4748 336 CDD crotonase-like 76 272 - -
Tpr4g4748 336 SUPERFAMILY ClpP/crotonase 72 331 IPR029045 -
Tpr4g4748 336 TIGRFAM menB: naphthoate synthase 73 332 IPR010198 GO:0008935|GO:0009234
Tpr4g4748 336 ProSitePatterns Enoyl-CoA hydratase/isomerase signature. 174 194 IPR018376 GO:0003824
Tpr4g4748 336 Pfam Enoyl-CoA hydratase/isomerase 84 330 IPR001753 GO:0003824
Tpr4g4748 336 Hamap 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 62 335 IPR010198 GO:0008935|GO:0009234
Tpr4g4748 336 PANTHER NUCLEOSIDE-DIPHOSPHATE-SUGAR EPIMERASE 9 336 IPR010198 GO:0008935|GO:0009234
Tpr4g4748 336 Gene3D - 276 324 IPR014748 -
Tpr4g4748 336 Gene3D - 58 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4748 Tpr-Chr4 56028626 56038793 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4748 1 336 Acyl Lipid Metabolism Gene Families AT1G60550 75.221 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4748 K01661 - han:110871684 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4748 4 56028626 56038793 Tpr4g4748 4 56028626 56038793 ECH