Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4744 ATGGGATCTGAAGGGCCAAAGGCAATTACAATACATGTAACTGGGTTTAAGAAGTTTCAAGGAGTGCCTATAAACCCTACAGAGTTTATTGTTAATAATCTGAAGGATTATGTTGAAAAGAAAGGTCTTCCAACTGGTGTTATTCTTGGAAGTTGCACTGTTCTTGAGGTAGCTGGTGATGGTGCACTTCCTCAGCTATATCAGACAATGGAATCTGTTGTGTCTAAAACAGATGCAACTAGCAATGCAAATGTTGTGTGGCTTCACTTGGGGGTGAATAGTGGAGCTGCAAGGTTTGCCATTGAGCGATTGGCAGCGAATGAAGCCACTTTCCGCTGTTCTGATGAATTAGGATGGCAACCACAGCAAGTCCCGATAGTCGTTGAGGATGGAGGAATTTCTCGAACAAGAGAGACTTCTCTACCTGTTGATGCAATCTTGAATTTCTTGAAGAAGGAAAAAGGTTATGATGTAATGGTATCAGATGACGCCGGGCGATTTGTTTGCAATTACGTGTATTACCACTCTCTCCGGTTCGCAGAACAGAAGGGTAACAAGTCTCTATTTGTCCATGTTCCTTTATTTTCGAGAATCGATGAAGAAACTCAGATGAGATTTATAGCCTCTCTTTTGGAGGCCATTGCTTCTGCATGTTAA 657 0.4201 MGSEGPKAITIHVTGFKKFQGVPINPTEFIVNNLKDYVEKKGLPTGVILGSCTVLEVAGDGALPQLYQTMESVVSKTDATSNANVVWLHLGVNSGAARFAIERLAANEATFRCSDELGWQPQQVPIVVEDGGISRTRETSLPVDAILNFLKKEKGYDVMVSDDAGRFVCNYVYYHSLRFAEQKGNKSLFVHVPLFSRIDEETQMRFIASLLEAIASAC* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4744 218 PIRSF Pyrrolidone-crbxlat_pptds 8 218 IPR000816 GO:0005829|GO:0006508|GO:0016920
Tpr4g4744 218 PANTHER PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED 1 218 IPR016125 -
Tpr4g4744 218 Gene3D - 8 218 IPR036440 -
Tpr4g4744 218 PANTHER BNAA09G31040D PROTEIN 1 218 - -
Tpr4g4744 218 Pfam Pyroglutamyl peptidase 11 195 IPR016125 -
Tpr4g4744 218 SUPERFAMILY Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) 9 215 IPR036440 -
Tpr4g4744 218 CDD Peptidase_C15 9 216 IPR000816 GO:0005829|GO:0006508|GO:0016920
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4744 Tpr-Chr4 55955490 55959151 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4744 K01304 - gmx:100784344 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4744 4 55955490 55959151 Tpr4g4744 4 55955490 55959151 ECH