Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4734 ATGTCTAAAACAAGTTTCAAAGAAAATGTAAGAAGACAAGCTTTGGAGAGGAACACAAGTTTCAAAGATACACAAAAAATATTGAACCAAAGTTTTTTCCATAATAAAAACTTTAAAAAAGTGTACCCTATTGGGCTTCAAAAGAGCACTTCTTCACTATCTTTATCTTCAGTTTCATTATCTTTGTCACAAAACTCAAATGACTCTTCTCAAGCTGATTCTTTGACTCCATTGGATGAAAAGATTTCATTGGCACTTCGTTTGATTTCGTCGTCATCACATGAAAGAAGAGAATGTGTACCTAAAGCTATACATCAACCAAGTCCACTAGTGACTATTGAGCCAGGGGAATTGAAAAGATGCAATTGGATCACAAAAAATAGTGATAAGCTGTACATAGAATTTCATGATGAATGCTGGGGAGTTCCAGCTTATGACGACAACAAATTATTTGAGCTGCTTGCAATGTCTGGATTGCTCATGGACTACAATTGGACAGAAATTATAAAAAGAAAGGATCCACTCAGAGAAGTTTTTGCTGGATTTGATCCTTACTCTGTTGCCAAAATGGAGGAAAAGGAAATCATAGAGATAACATCAAACAAAGCACTTTCTTTAGCAGATAGCAGAGTTATGTGCATTGTTGACAATGCCAAATGCATAATGAAGGTTGTTAGGGAATGTGGATCATTTAGTAGCTACATATGGGGTTTTGTAAATCACAAACCAATAATTAACAAATACAAATACCCAAGAAATGTCCCATTAAGGAGTCCAAAAGCAGAGGCTCTAAGCAAGGACATGGTAAAACGTGGGTTTAGGTTTGTGGGTCCAGTGATTGTGCACTCTTTTATGCAAGCTGCAGGATTGACCCTTGATCATCTTGTTGATTGTTATAGACATAGTGAATGTGTGAGCCTAGCAGAAAGACCTTGGAGGCATATCTAA 948 0.365 MSKTSFKENVRRQALERNTSFKDTQKILNQSFFHNKNFKKVYPIGLQKSTSSLSLSSVSLSLSQNSNDSSQADSLTPLDEKISLALRLISSSSHERRECVPKAIHQPSPLVTIEPGELKRCNWITKNSDKLYIEFHDECWGVPAYDDNKLFELLAMSGLLMDYNWTEIIKRKDPLREVFAGFDPYSVAKMEEKEIIEITSNKALSLADSRVMCIVDNAKCIMKVVRECGSFSSYIWGFVNHKPIINKYKYPRNVPLRSPKAEALSKDMVKRGFRFVGPVIVHSFMQAAGLTLDHLVDCYRHSECVSLAERPWRHI* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4734 315 PANTHER DNA GLYCOSYLASE SUPERFAMILY PROTEIN 7 315 - -
Tpr4g4734 315 Gene3D Hypothetical protein; domain 2 118 302 - -
Tpr4g4734 315 PANTHER OS04G0501200 PROTEIN 7 315 - -
Tpr4g4734 315 Pfam Methyladenine glycosylase 126 301 IPR005019 GO:0006284|GO:0008725
Tpr4g4734 315 SUPERFAMILY DNA-glycosylase 119 305 IPR011257 GO:0003824|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4734 Tpr-Chr4 55828358 55832727 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4734 K01246 - gmx:100810677 488.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4734 4 55828358 55832727 Tpr4g4734 4 55828358 55832727 ECH