Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4733 ATGTCTAATAAATTTGACAGCCCTGTTCAAACCCAGATGGCCGTGGCTGTATTCCGTAGTCCGCTAGGTAGGGAGTACCTTGAGAAAAAGAGCATGGGAGGAAGACAATCTTCTGGCAAAAGAAGGGTTTTTGTCCAAACTGAAAGTGGGTGCGTCTTGGGCATGGAATTGGATCGTAGTGACAATGCACATACTGTAAAGAGGAGGTTGCAGATTGCCCTTAATGTCCCAACTGAAGAGAGCTCACTTACTTTTGGGGATGTTGTCTTGAAGAATGACCTTAGTGCTGTTCGGAATGATAGTGCCCTTCTTCTTACACGTAACCTTATGCACAGAAGTTCATCCACTCCATGCCTGTCACCGACTGGAAGGGATATGCAGCAAAGGGACAAGAGTGGTCCTATTGAGTTATTAGGTCAATCAAGTAGCCTGGATATAATGAAGCATATGGTCAAGGACATTGTGAAGGCAATGAAGATGGGGATAGATCCAATTCCAGTTCATAGTGGCCTTGGAGGTGCATATTATTTCCTGAACGTAGGAGGCGAGAGTGTTGCAATTGTGAAACCAACAGATGAGGAGCCTTTTGCCCCAAACAATCCAAAAGGATTTGTTGGTAAAGCTCTTGGGCAACCGGGTTTGAAACGTTCAGTTCGGGTTGGGGAGACTGGGTTCAGGGAAGTTGCAGCTTATCTTCTTGACTATGGTAATTTTGCAAAAGTGCCTCCAACTGCCTTAGTGAAGATTACTCACTCAATATTCAATGTCAATGATGGAGTGAATGGGAAAAACATCCAGAAGAAGAAGCTGGTTAGCAAGATTGCGTCACTTCAGCAGTTCATACCTCATGATTTTGATGCAAGTGACTATGGGACATCTGGCTTTCCAGTTACTGCTGTGCATCGTATAGGGATATTAGACATTAGGATTCTTAACACAGATAGGCATGGTGGCAATTTGTTGGTTAGAAAAGTTGGGGCCTTCAGCGAGGTTGATCTAATTCCTATTGATCACGGGCTTTGCTTGCCAGAAGCTTTGGAGGACCCATACTTTGAGTGGATTCATTGGCCTCAGGCTTCAATTCCATTCTCCGAGGATGAGCTTTCTTACATCGAAAATCTGGATCCTGCTCGAGATTGTGAGATGTTACGAAAGGAACTGCCTATGATTCGGGAGGCTTGTTTGAGAGTCTTAGTTCTCTGCACCATTTTCCTCAAGGAAGCTGCTGCTTATGGTCTGTGCCTTGCTGAAATTGGTGAGATGATGACTAGAGAGTTCCGCATTGGTGAGGAGGAACCCAGTGAACTGGAGGTTGTTTGTTTGGAAGCAAGGAAGATGTTGGCAGAGAAAGAAGAACTATCTCCCAGGACTGATTTGAGTGATAATGAATTTTTGTTTGATATAGACTGTGATGTAGCTGGGTCGGATTTCACTATGAAGATGACAATGGATGATCTTCTACCTAAAGCACCTTTCTCACCTAGACTTGGAGGCGGGCATGGTCGCAACCCACTTTCTAAATTGCATGAGAGCATTGTGGAGGAGGAAGAAGAAGGTGATGGAGAATTTCCAGAGGGTGTTGTCACTTTTCCCCTTCATGGAAAGAACACAGCGGTTTCAAAACTTTCTGTTTCGCTGAAAAACATGATGCTAAGTGAGACAAGCCAGAAACACCAGAAGCATTCAGGAGGAAAGGTTGATAATGACTGTCATGGGAATGCATCCTCTGGTCATAGGAGTGCCAATGAGCAGCTTCCTTCAAGCTCAAGCTTTGTGAAGCTGGCAGATGTGACTGAAGATGAATGGACAACGTTTCTGGAGAAGTTTCAAGAATTGCTGTACCCGGCATTTGGCAAGAGGAAATCCATAACCATAGGTCAGAGACAGTTACAGAGGCTTGGTACCTCGTGCCAGTTTTGA 1920 0.4474 MSNKFDSPVQTQMAVAVFRSPLGREYLEKKSMGGRQSSGKRRVFVQTESGCVLGMELDRSDNAHTVKRRLQIALNVPTEESSLTFGDVVLKNDLSAVRNDSALLLTRNLMHRSSSTPCLSPTGRDMQQRDKSGPIELLGQSSSLDIMKHMVKDIVKAMKMGIDPIPVHSGLGGAYYFLNVGGESVAIVKPTDEEPFAPNNPKGFVGKALGQPGLKRSVRVGETGFREVAAYLLDYGNFAKVPPTALVKITHSIFNVNDGVNGKNIQKKKLVSKIASLQQFIPHDFDASDYGTSGFPVTAVHRIGILDIRILNTDRHGGNLLVRKVGAFSEVDLIPIDHGLCLPEALEDPYFEWIHWPQASIPFSEDELSYIENLDPARDCEMLRKELPMIREACLRVLVLCTIFLKEAAAYGLCLAEIGEMMTREFRIGEEEPSELEVVCLEARKMLAEKEELSPRTDLSDNEFLFDIDCDVAGSDFTMKMTMDDLLPKAPFSPRLGGGHGRNPLSKLHESIVEEEEEGDGEFPEGVVTFPLHGKNTAVSKLSVSLKNMMLSETSQKHQKHSGGKVDNDCHGNASSGHRSANEQLPSSSSFVKLADVTEDEWTTFLEKFQELLYPAFGKRKSITIGQRQLQRLGTSCQF* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4733 639 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 5 639 IPR044571 -
Tpr4g4733 639 SUPERFAMILY Ubiquitin-like 38 107 IPR029071 -
Tpr4g4733 639 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE 5 639 - -
Tpr4g4733 639 CDD Ubl_ubiquitin_like 43 93 - -
Tpr4g4733 639 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 161 455 IPR000403 -
Tpr4g4733 639 Pfam Phosphatidylinositol 3- and 4-kinase 185 418 IPR000403 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4733 Tpr-Chr4 55819967 55824083 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4733 1 639 Acyl Lipid Metabolism Gene Families AT1G26270 68.789 0.0 863
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4733 - - aip:107643746 999.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4733 4 55819967 55824083 Tpr4g4733 4 55819967 55824083 ECH