Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4559 ATGAAATTTATGAAACTAGGATCCCGTCCAGATACTTTCTACACTACAGAGTCAGTAAGGTCAATTTCTTCTGAAATTTCAAGTGATCTCATAATTCAAGTAAAAGGAACTAGATATCTTCTTCATAAGTTTCCACTTCTATCAAAATGTTTGCATCTACAAAGATTATGTTCAGAGTCACTTGATTCACCAAATCATCATCAAATAGTACAATTACCAGATTTTCCGGGCGGAGTAGAAGCATTTGAACTTTGTGCAAAATTCTGCTATGGAATCACAATCACTATAAGTCCTTACAACATTGTATCGGCAAGATGCGCCGCGGAATATTTACAAATGACTGAAGATGCAGAAAAGGGTAACTTGATTTATAAGCTAGAAGTTTTCTTCAATTCATGCATCCTTCGCGGTTGGAAAGATTCAATTGTGACATTGCAAACAACAAAAGTGTTGTCTTTATGGTCAGAGGATTTGTCAATTACAAATAGATGCATTGAAGCTGTTTGTTCAAAGGTCTCAAAAAGGGTTAGAAATGATGATGATATATCTTGTAGTGGAACAGAAAGTTTGAGAGATAAATCAATAAGAAAAAGATGGTGGGGTGAAGATTTAGCAGAATTGAAAATTGATCTTTATTGGAGAATCATGATTGGTGTAAAATCTGATGGAAAGATACCTTCAAATCTTATTGGTGATGCTTTGAAAATTTATGCTTTTAGATGGTTACCAAAAATCGATTCTGATTCTGAATCAGGAAGTGAAATAGCTTCAAAGCATGTTTTACTTTTGGAATCAATAGTAAATTTGCTTCCGGCTGAAAAAGGCGCTGTTTCTTGTAGCTTTCTTCTTAAGCTTTTGAAAGTCGCCAATGTTTTGAATGCTTCTTCATCTTCAAAGATGGAATTGGTTAAAAGGGTAGGACTTCAATTAGAGGAAGCAACAGTGAATGATCTTATAATGGTTTGTGATGTGGATTTCGTGATTAAAATTTCAGAACAGTTTATGTTGCAATTGGTTCAAAGTCCACCAACTAGTCCTGTAAGATCTAAGTTAGTTTTCGAAAGAAGGCGGTCGCGTTCAGCTGAGAATGTTGATTTTGAATTGCAAGAGGGTAGAAGATCTTCATCAGCTTCACATAGTTCAAAATTGAAGGTTGCTAAGCTTGTTGATAGGTATCTGATAGAGGTTGCTAAGGATGTGAATTTGTCTCTGGATAAATTTGTTGCTCTTGCTGAAAGTGTACCTGAATTTGCAAGATGTGATCATGATGATCTTTACAATGCTATTGATACTTATCTCAAGGTTCATCCAGAGCTCAACAAGAGCGAAAGGAAAAGATTATGCAGAATTCTAGACTGCAAAAAACTATCTATGTCATCATGTATGCATGCTGCACAGAACGAGCTACTACCGCTAAGACTTGTTGTCCAAGTTCTCTTCTTTGAGCAAGCTAGAGCAGCAAAAACTTGTGGCAAAGTCAGCAGCATATCAAGCAACATCAAAGCATTACTCACTTCTTATGGAATTGATCCATCAAAACATGCAGCACAATTAAGCACAACTACAAGTATACATACTGATGATAATTGGAGTGTTAATGGATTCAAGTCACCAACAAAATCAACTCTTAGGATGAAACTAGCCGAGGATGATTTAGATGAGAATAATGATGTGGCAAGCAATAGCATTGGAAAAAGTTCTAGATTTAAAAGTTTTTGTGCTCTTCCTACTAAGCCTAAACGAATGTTTAATAAGTTGTGGTTTACCAATAAAAGCACAACTCAAAAGAATTAA 1794 0.354 MKFMKLGSRPDTFYTTESVRSISSEISSDLIIQVKGTRYLLHKFPLLSKCLHLQRLCSESLDSPNHHQIVQLPDFPGGVEAFELCAKFCYGITITISPYNIVSARCAAEYLQMTEDAEKGNLIYKLEVFFNSCILRGWKDSIVTLQTTKVLSLWSEDLSITNRCIEAVCSKVSKRVRNDDDISCSGTESLRDKSIRKRWWGEDLAELKIDLYWRIMIGVKSDGKIPSNLIGDALKIYAFRWLPKIDSDSESGSEIASKHVLLLESIVNLLPAEKGAVSCSFLLKLLKVANVLNASSSSKMELVKRVGLQLEEATVNDLIMVCDVDFVIKISEQFMLQLVQSPPTSPVRSKLVFERRRSRSAENVDFELQEGRRSSSASHSSKLKVAKLVDRYLIEVAKDVNLSLDKFVALAESVPEFARCDHDDLYNAIDTYLKVHPELNKSERKRLCRILDCKKLSMSSCMHAAQNELLPLRLVVQVLFFEQARAAKTCGKVSSISSNIKALLTSYGIDPSKHAAQLSTTTSIHTDDNWSVNGFKSPTKSTLRMKLAEDDLDENNDVASNSIGKSSRFKSFCALPTKPKRMFNKLWFTNKSTTQKN* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4559 597 SUPERFAMILY POZ domain 22 115 IPR011333 -
Tpr4g4559 597 Pfam NPH3 family 199 461 IPR027356 -
Tpr4g4559 597 ProSiteProfiles NPH3 domain profile. 198 485 IPR027356 -
Tpr4g4559 597 Gene3D Potassium Channel Kv1.1; Chain A 15 119 IPR011333 -
Tpr4g4559 597 PANTHER OS12G0117600 PROTEIN 1 593 IPR043454 -
Tpr4g4559 597 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 1 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4559 Tpr-Chr4 53823523 53827172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4559 26 483 EF-hand Containing Proteins AT3G44820 34.706 2.12e-80 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4559 - - gmx:100792829 858.211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4559 4 53823523 53827172 Tpr4g4559 4 53823523 53827172 ECH