Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4540 ATGGGTTTAGATTTGTTTCCATTGACAAAACCAAAATCTAGGAACACACAAATTCGTTTTGTTAATGCAAGAAGACAACACAAATGTGGACAAGCACACACAACAAAACCAAACATGAATTTTAGCATCTCCCTCCTCCTACATTTCCTTCTCCTTGTTTCTTTGGTTTGTCATGTTTATTCTTCAGAAACAAGTGGCCAAAATCAAGCTTTTTTGCCAGAAGAAGAGTTTCACAAGTTGAAAAGGACAATAAGAATTCATCTTCAGAAGATCAACAAGCCTTATGTTAAGACAATTCAGAGTCCTGATGGTGATATCATAGACTGTATTGTGTCTCATAAACAACCAGCATTTGATCATCCTCGATTGAAAGGACAAAAACCATTGGACCCTCCCGAAAGACCAAAAAGTCATAGTCGGAGGAATATTTTGAATGATAATTTTCAACTGTGGAGCTTATCAGGTGAATCATGTTCTGAAGGAACGGTTCCAATTAGAAGAATAAAAGAAGAAGACATGTTAAGAGCTTACTCTATTAACACATTTGGAAGGAAATTAAAACGTGTTAGAAGGGACACCATTGGCAATGATGGACATGAGTATGCAATTGGGTATGTGAGTGGGGATGAATACTATGGAGCAAAAGCTAGCATAAACGTGTGGGACCCACAACTGGAAAGTCCAGATGAATTCAGCTTGTCTCAAATATGGATCACAACTGGTTCTTTTGAGAAAGATCTCAATACTATTGAAGCTGGTTGGCAGGTCAGCCCAGAGCTCTATGGGGATAGCTACCCTAGATTCTTTACTTATTGGACGAGTGATGATTATCAAGGAACTGGGTGCTACAATTTACTTTGCTCTGGCTTTGTTCAAACTAGTAGTAAAATTGCAATTGGAGCTGCAATTTCTCCAACTTCTACATATAATGGAGGCCAATTTGATATTAGCTTAATGATATGGAAGGATCCAAAGAATGGAAATTGGTGGCTTGAATATGGATCCAATGGAGAAATAATTGGATATTGGCCATCTTCTTTGTTCACACAATTAAAAGATCATGCAACTATGGTTCAATTTGGTGGAGAAATAGTGAATTCAATGTCAACAGGTGCTCACACTTCCACTCAAATGGGTAGTGGACATTTTGCTGATGAGGGTTTTGCAAAAGCTTCATATTTTAGAAATATGCAAGTTGTAGATTCTGATAACAGTTTAATTCCGTTGCAAAATCTCAAAGTTCTAGCTAACTCTCCAAATTGTTATAATATACAAGAAGGGACTAATAATGGGTGGGGGAATTATTTTTACTATGGTGGACCTGGTAGGAATGTGAATTGTCCCTAA 1347 0.3734 MGLDLFPLTKPKSRNTQIRFVNARRQHKCGQAHTTKPNMNFSISLLLHFLLLVSLVCHVYSSETSGQNQAFLPEEEFHKLKRTIRIHLQKINKPYVKTIQSPDGDIIDCIVSHKQPAFDHPRLKGQKPLDPPERPKSHSRRNILNDNFQLWSLSGESCSEGTVPIRRIKEEDMLRAYSINTFGRKLKRVRRDTIGNDGHEYAIGYVSGDEYYGAKASINVWDPQLESPDEFSLSQIWITTGSFEKDLNTIEAGWQVSPELYGDSYPRFFTYWTSDDYQGTGCYNLLCSGFVQTSSKIAIGAAISPTSTYNGGQFDISLMIWKDPKNGNWWLEYGSNGEIIGYWPSSLFTQLKDHATMVQFGGEIVNSMSTGAHTSTQMGSGHFADEGFAKASYFRNMQVVDSDNSLIPLQNLKVLANSPNCYNIQEGTNNGWGNYFYYGGPGRNVNCP* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4540 448 Pfam Neprosin 229 441 IPR004314 -
Tpr4g4540 448 MobiDBLite consensus disorder prediction 120 140 - -
Tpr4g4540 448 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 36 448 - -
Tpr4g4540 448 Pfam Neprosin activation peptide 98 205 IPR025521 -
Tpr4g4540 448 PANTHER - 36 448 - -
Tpr4g4540 448 Gene3D - 223 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4540 Tpr-Chr4 53611712 53617545 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4540 - - gmx:100792240 657.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4540 4 53611712 53617545 Tpr4g4540 4 53611712 53617545 ECH