Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4520 ATGGCAACAAAGAAAGTTGATCAGGAAAAAGAACTAGAAGATCCCATCCATGGAGACATCTTAGAAGCCACACTCTCGCACGTGCCACTAATTTACTTGGTGCCTGCCAGTTACGTGTCAAAAGAATGGAGCGGTGCCGTGTCGAGGTCCCTCCGCCACATCAACCCGGTGAAGCCATGGCTCATGGTTCACACTCAAAACCCCCGTGCTCCTCACATGACCACAACTTACGCGTACGACCCACGCACGCTATCGTGGATCGAAATTCACGCGCCACAAGTCAAACACACGTCCGCTCTTCGATCATCACACTCCACACTCCTCTACACGATCTCTCCCACTGAATTCTCCTTCTCTGTGGACCCGCTCCACCTCATGTGGCACCACACATCATCACCGCGTGTTTGGCGCGTTGATCCCATCGTTGCACGCGCGGGAAACCACATCGTGGTTGCTGGTGGTGCGTGTGATTTCGAGGATGATCCTTTAGCAGTGGAGATGTATGATATGGAGTCTCACAAATGGATCCAATGTCAGTCAATGCCTGAGATGATGAAGGACACAACAACACTGACATGGCTCTCTGTTGTCGTTATTGGAGAGTTTTTGTACTTAATGGCGAAAAATACTGGCATAATGTACTCGTTCAATTGTAAAACAATGATGTGGCAAGGACCATATGATCTGCGAGGAGGGGAGGAGAGTGTATTCTACTACACAATGGGAACGGTGCAGAACCGTTTGGTGGTGGTGGTGGGAATAGTAGGTGGCGAGGAAAATGTGAAAGGAGTGAAAGTTTGGGAAATAAAAGAGGAATTGGAGTTAGGATTGGGAATGGTGGAATTAGGTGTGATGCCGGAAGATATGGTTGTAAAACTGAGAGGTGAGAGTGGGAGTGAGTTGTTGAATTCGATTGAGTTGGTTTCGACAGGAAATTTTGTGTATGTTTATAATGCATCGGAACCAGAGGAGATGGTGGTTTGTGAGGTGTTGAAGAGAGGAGGGTGTGAGTGGTGGAGTGTGAGGAATGCGGTGGTGAATGACGAAATGCGGTTGAGAAGAATGGTGTTATGTGGTGGTGATGTGGGATTGGAGGATTTGAAGAGCGCGGCCTTGCGCGATTGTAAATTTGTATTGAAACAATAA 1146 0.4799 MATKKVDQEKELEDPIHGDILEATLSHVPLIYLVPASYVSKEWSGAVSRSLRHINPVKPWLMVHTQNPRAPHMTTTYAYDPRTLSWIEIHAPQVKHTSALRSSHSTLLYTISPTEFSFSVDPLHLMWHHTSSPRVWRVDPIVARAGNHIVVAGGACDFEDDPLAVEMYDMESHKWIQCQSMPEMMKDTTTLTWLSVVVIGEFLYLMAKNTGIMYSFNCKTMMWQGPYDLRGGEESVFYYTMGTVQNRLVVVVGIVGGEENVKGVKVWEIKEELELGLGMVELGVMPEDMVVKLRGESGSELLNSIELVSTGNFVYVYNASEPEEMVVCEVLKRGGCEWWSVRNAVVNDEMRLRRMVLCGGDVGLEDLKSAALRDCKFVLKQ* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4520 381 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 2 371 - -
Tpr4g4520 381 PANTHER KELCH REPEAT-CONTAINING F-BOX-LIKE PROTEIN 2 371 - -
Tpr4g4520 381 SUPERFAMILY Kelch motif 59 272 IPR015915 GO:0005515
Tpr4g4520 381 Gene3D - 60 277 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4520 Tpr-Chr4 53375049 53376559 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4520 - - adu:107481346 442.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4520 4 53375049 53376559 Tpr4g4520 4 53375049 53376559 ECH
Tpr2g1709 2 20239065 20240666 Tpr4g4520 4 53375049 53376559 PCT